Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_3020 |
Symbol | |
ID | 8881139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 3060491 |
End bp | 3063190 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_003508784 |
Protein GI | 291297386 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00270264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0711602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTTT CGGAGACCGC CAGGGCGCTG TGGGCCAAAA GCGACCGGGG CCGGGAGCAG GGCGCCTGGC ATCCGCTCAT TGCACACTTG CTCGACGTGG CGGCCTGCGC CGAGGCGATC CTCGAGCGCG AGCCCCCCAA GACCCTCGAG CTTTACGCCC ACGATCTAAG CCTGGAGCCC CAGCAAGCCA AGGCCTGGGT TTGCGCTCTG GCGGGCTTGC ACGATATCGG CAAGGCCAGC CCGGCCTTCC AGCAGAAATG GCCCGAGGGC AAGGAACGGC TCTGGGCCAC AGGGCTCACC TGGTCAAGCG ACCCAACGCC GCCGCCCCAC GACCTTTCCC ACAGCATCAT CAGCGAGGTG GTGCTGCCCG AACTGCTCGA GGCCAGGGGT TGGAAATACC GGGCCGCCCA GAATGTCGCA GCGGCGGTGG GGGAGCACCA CGGCTTCCGG GCAACAAGGG GCGATCTGGA CAAAGCAACA ACCCGCGAGA AAGGCAACGC GAACTGGGAC GAGGTGCGCC GCGAGCTATT CGAAGCGGTG CTCGAGGTGC TGGGGGTGGG GGAGGCTCCC AAAGTTAAGC TCTACGGGGG TGCGGCTTTC GAGCGCCTGG CGGGCCTTAC CAGCTTCGCC GACTGGATTG GCTCGAGCCT CGACTTTCAC CCCCTCGGCG ACGACCTGGC CGGGTATTAC CGGGAGGCCA AGGCGCGGGC CGCGCAAAAG CTCGATGGCA TCGGCTGGTT CCAGCGCAAA ACCCTGATGC CCGAGCCGCA AAGCCTGGAA GAGGTCTTTG CCTATCTGGG TAGCCCCGAA GCGCCGTTCA GGGCCCGCCC ACTGCAAGCT GCCATCGAGC GCCTCCTGGA GGGCGTGGAT TGCCCCGCCT TATTGCTGGT GGAGGCCCCC ATGGGCGAAG GCAAGACCGA GGCGGCCTTC TACGCCCACC TGCGCCTGCA AGCCGCCAAC GGCCACCGGG GGATGTACGT GGCCCTGCCC ACCCAGGCCA CCGGCAACCT CATGTTCGAG CGGGCCAAGG CCTTTCTGGA TCGCTGGGGG CAGTCCCGCA AGCTCGACCT GCAACTCTTG CACGGGGCCA GCGAGTTGGT GGAGGCCTAC CAGGAGATAC GCGTGCGCCC CAACAGCCCC GAAGAGCGCG AGGAAGGGGT GGAGGCCCAG GTCTGGTTCT CCCACCGCAA GCGCGGTTTG CTCTCCGAGT ACGCCGTGGG CACGGTGGAT CAGGCCCTCC TGGGCATCCT GCCCACCAAG CACCAGTTCG TGCGGCTGTG GGGTCTGGGC AACCGGGTGG TGGTGCTGGA CGAGGTGCAC GCCTACGACA CCTACACCAG CGGCCTCATC GAGATGCTGG TGCGCTGGCT TAGGGCGCTG GATTCATCGG TCGTGCTGAT GAGCGCGACC CTGCCCAGGG CCAAGCGGGA AAATCTGCTC AGGGCGTTTG GGGCCGAGAA GATAACCGAG GACAAGCCAT ACCCCCGCAT TACCCGTGTC GTAAAGGACA ACCCCATGCC CGTGGTGGAG ACCTTTGAGG CGTGCAAACA GCTCACCCTG CAGCTACGGG CCTTGCCGCT CGACCTCGAG GCCATCGCCG AGCAGGCGCT CGAGCAGGCC CGCCGGGGCG GCTGTGTGGC CTGCATTGTC AACACTGTGC AGCGGGCGCA GGAGCTGTAC CGGGCTTTGG CGGGCAATTC GGATGGGGTG GAGGTATACC TGTTTCATGC CCGCTATCCG CTCGAGGAGC GCTTAAATCG CGAGCAGCTT GTTCTAGCTA AGTTTGGTAA GCAGGGGCAG CGCCCTAAAA GGGCCATCCT GGTTGCCACC CAGGTGGTTG AACAATCGCT CGACCTCGAC TTCGATGTGA TGTTCACCGA CCTGGCCCCG GTGGATCTGG TTTTGCAGCG CGCAGGGCGG CTGCACCGCC ACGCCCGCAG CGCGGAGGAG CGGCATTCCC ACACCGAACC GGTGTTGTGG GTGGCGGGTT TGGAGTGCGA AGGGGTGCCC GACTTCGGTA CGGCCGAACG CATCTACGAG CGCTACGTTC TGCTGCGGAG CTGGCTGGCC CTGCGCAACC GCACCCGGAT CGGGCTTCCG GGCGATATCG ACCGCCTGGT GCAGGAGGTT TACAGCGACA TGCCCCAGGG GCCTTCGGAA GCGTGGAAGA GGGCCCTTGA GGAAGCCCAG GCCCGCATGG AAAAAAGGGA CGCCCGAGAT CAGGACGAGG CCTTCTACGC GCCTTTTGGC GACCCCGATG AAACCGGCTG GCTCGAGCCC CGGGACTTCA CCAGGCTGCC CGACGACGAG CCCAACCCCG ACGACGACCC CAGCCTGCTC AAAACCCGCA AAGGCCCCCC CAGCGCCACG GTGGTGCTGC TGCATAGGGT GGGCGGGCAG CTCTGCCTCG ATGCGGGCGG GAAGGAGGGG GTGAGCCTGG CCAGCCAGCT CGAGCTGGCC CAGGCCAGGC GCATCTTTGC CCGCTCGGTC AAGCTCAGCC GGTACGAGCT GGTGCAAAAC AACCTCGAGG CCCTGGAGGC CCATCGGAAA GCCCACGACC TGCCCACCAA GCCCTGGAGT GAAACTCCCC TATTGGCCCA TGCCCATCCG GTGGTGCTCG AGGGAGGGTG CGCGGTGCTG GGGGAACTTG TGCTCGAGCT TCACCCCGAG CTTGGGGTGG TTTACGGGAG TGCGCTATGA
|
Protein sequence | MSLSETARAL WAKSDRGREQ GAWHPLIAHL LDVAACAEAI LEREPPKTLE LYAHDLSLEP QQAKAWVCAL AGLHDIGKAS PAFQQKWPEG KERLWATGLT WSSDPTPPPH DLSHSIISEV VLPELLEARG WKYRAAQNVA AAVGEHHGFR ATRGDLDKAT TREKGNANWD EVRRELFEAV LEVLGVGEAP KVKLYGGAAF ERLAGLTSFA DWIGSSLDFH PLGDDLAGYY REAKARAAQK LDGIGWFQRK TLMPEPQSLE EVFAYLGSPE APFRARPLQA AIERLLEGVD CPALLLVEAP MGEGKTEAAF YAHLRLQAAN GHRGMYVALP TQATGNLMFE RAKAFLDRWG QSRKLDLQLL HGASELVEAY QEIRVRPNSP EEREEGVEAQ VWFSHRKRGL LSEYAVGTVD QALLGILPTK HQFVRLWGLG NRVVVLDEVH AYDTYTSGLI EMLVRWLRAL DSSVVLMSAT LPRAKRENLL RAFGAEKITE DKPYPRITRV VKDNPMPVVE TFEACKQLTL QLRALPLDLE AIAEQALEQA RRGGCVACIV NTVQRAQELY RALAGNSDGV EVYLFHARYP LEERLNREQL VLAKFGKQGQ RPKRAILVAT QVVEQSLDLD FDVMFTDLAP VDLVLQRAGR LHRHARSAEE RHSHTEPVLW VAGLECEGVP DFGTAERIYE RYVLLRSWLA LRNRTRIGLP GDIDRLVQEV YSDMPQGPSE AWKRALEEAQ ARMEKRDARD QDEAFYAPFG DPDETGWLEP RDFTRLPDDE PNPDDDPSLL KTRKGPPSAT VVLLHRVGGQ LCLDAGGKEG VSLASQLELA QARRIFARSV KLSRYELVQN NLEALEAHRK AHDLPTKPWS ETPLLAHAHP VVLEGGCAVL GELVLELHPE LGVVYGSAL
|
| |