Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_3015 |
Symbol | |
ID | 8881134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 3055550 |
End bp | 3056245 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Cas5 family CRISPR-associated protein |
Protein accession | YP_003508779 |
Protein GI | 291297381 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000337648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0242997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACCC TGCTGTTGCG CCTGGCGGGC CCCATGCAGT CCTGGGGCAC CAAAAGCCGC TTTGACGAGC GAGACACCGA CCTCACCCCC TCCAAAAGCG GGGTGATCGG CTTGCTGTGT GCGGCTATGG GCATAGACCG CGAAGAGCGG GCGCCTGTGC TCGAGCTGGC GCGTTTGCGG ATGGGGGTGC GCGTCGACCA GCCGGGGGTG CTGCGCTACG ACTACCAGAC CGCCCAGAAC GTGATCGCCG CCGATGAGTC CAAGGTGCAC CCCACCACCA CATCCCGGCG CTACTACCTG GCCGATGCGG TTTTCCTGGT GGGGCTCGAG GGGGAAGACC AACGCCTCCT GGAGCGCGCG CACCGGGCGC TGAAGAACCC CTCCTGGCCG CTATTTCTGG GTAGAAAGGG CTACCTGCCC AGCCCAGGGG TGTATCTCGA GGACGGCCTG CGCGAGGAGC CTTTGCAGGA AGCCCTCAAG TACCGCTACC TCGGGCGCGA TTGGCCGAAG GACGAAGAGG GGAAGGATTG CGAGTCGGTC AGGTGCCTGG TCATGCTGGA AAACTGGGGC TCGAGCGAAG GTTCGCTGCG CATGGATCAG CCGCTGGGCT CCTTTGCGGA ACGCCGCTTT GGGGCCCGTT TTGTGGTTCC TCATTGGGTG GAGGTGAAGC GTGTACCTGA GCCGACTCCA GCTTGA
|
Protein sequence | MPTLLLRLAG PMQSWGTKSR FDERDTDLTP SKSGVIGLLC AAMGIDREER APVLELARLR MGVRVDQPGV LRYDYQTAQN VIAADESKVH PTTTSRRYYL ADAVFLVGLE GEDQRLLERA HRALKNPSWP LFLGRKGYLP SPGVYLEDGL REEPLQEALK YRYLGRDWPK DEEGKDCESV RCLVMLENWG SSEGSLRMDQ PLGSFAERRF GARFVVPHWV EVKRVPEPTP A
|
| |