| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2802 |
|---|
| Symbol | |
|---|
| ID | 8880915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 2840882 |
|---|
| End bp | 2843134 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_003508569 |
|---|
| Protein GI | 291297171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.353493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC CTACCCAGCC CACCGCGGCG CCCCCATCGC CCACAACACA TTCTGCAGTT
GAGGCCTTGT GGCAGCGGCT CGAGCCCTAT CTTCACTACC TGAACGATGC CGCCAAGGCC
CAGGTGCGGG AAGCCCTCGA GTTCGCCTAC CGTGCTCACG AAGGCCAGCA ACGCAAGAGC
GGCGAGCCCT ACATCGTTCA CCCGGTCGCA GTTGCGCAAA TCCTGGCTGA GCTGGGCCTG
GATGTCGAGA CCCTGCTGGC TGGACTCCTG CACGACACCA TCGAGGACAC CGAGGTTCGG
CCCGAGGATA TTGAAGAGCG CTTTGGGGCC GCGGTACGAA AAATTGTGGA GGGCGAGACC
AAGGTCTCCA AGCTCTACAA GCTGGCCCAT GCCGCCCAGG AAGATAAGCA CGCCGAGGGA
AAGCACGCCG AGGACCTGCG CCAGATGTTT ATCGCCATGG CCGAGGACGT GCGGATCATC
ATTGTCAAGC TGGCCGACCG GCTGCACAAC CTGCGCACCC TGGAGTTTAT GCCCCCCCAC
AAACAGCAGC GCATCGCCCG CGAAACCCTG GAGATTTATG CCCCGTTGGC GCACCGGCTG
GGGATTGGGC AGGTCAAGCT CGAGCTCGAA GACCTCTCCT TCCGCTACCT CGACCCCGAG
AACTACCAGG CCCTCGAGCG CCGTCTCAAA AGCCACCGGG CCGAGCGGGA AGCCGCGGTG
CAAGCAGCCA AGGAAAAGCT CGAGCAGGCC CTGGCCCGCG ACTTCATCCT CAAGCAGTCC
ATCAAAAAAT TCGAGGTCAC CGGCCGCACC AAACACCTGT TCTCCATCTG GAAAAAGATG
GAGCGGGAGG GCAAAACCAT CGAACAGATC TACGATCTGC TGGCCTTGCG GGTGATCCTG
GATCCGCGCC AGGGGCCGGA TCCCGAGGAA AACAGCTTGC GTGAGAAGCA GGTCTGCTAT
CACGTGCTGG GCCTGGTGCA TGCCCTGTGG CAGCCCATCC CGGGCCGGGT CAAGGACTAC
ATCGCGGTGC CCAAGCCCAA CGGCTATCAG TCGCTGCACA CCACCGTCAT CGCCGTGAAC
GGGCTGCCGC TGGAAGTGCA GATTCGCACC AGGGAGATGC ACCGGGTCGC CGAGTTTGGC
GTCGCCGCCC ACTGGCTCTA CAAGGAGGGC GTCACCGACC CCGAAGACCT CCGTCGGCGG
GTGGGCTGGC TCAAAAGCAT CCAGGACTGG CAGCAGGAGT ACAGCAGCTC GCGTGATTTC
GTCGAGGCCG TCACCAAGGA GTTGCTGGGC GACCGGGTTT TTGTCTTTAC CCCCAAGGGG
AAAATTATCA ACCTACCCAA GGGCTCGAGC CCGGTAGACT TCGCCTACCA CATTCACACC
GAGGTGGGCC ATCACATGGT AGGGGCCAAG GTGAATGGGC GCATCGTGCC CCTCAGCTAC
GAGTTGCAAA ACGGCGAGAT TGTGGAGATT CTCACCGCCA AGACCGCCCA CCCCTCCAAA
GACTGGATCG ATTACGCCAA AACCCGCTCA GCCAAGCAGA AAATCCGCAT GTACTTCCGG
GCTTTTGAGC GGGCCGAGAC CCTGGAAAAA GGCATGCGGA TGCTGGAGAA GTACTTCAAG
CGGCGGGGCC TGCCCCGGCC GCTGGAAAGC CAGCTCGAGG AGGTGGGGCG CAAGCTTATC
AAAAGCTCGT CGCCAGAAGA TCTGTACGCT GCCATTGCAA CCGGGCGGGT GGCACCCCAG
CAGATTGCCC GCATCCTGGT ACCCAGAACC GAATCCGCTG CCGCCAGGCC CAAGCCCGTC
AAGAACACCC TGGGCATCCG CCTGGAGTCC AACCTCAACG TGCCCATTAA GCTGGCTAGC
TGCTGTGAGC CCGCCAAAGG CGATACCATC CTGGGGTACA TCACCCGGGG GCGGGGGGTC
ACGATTCACA AAGCGGGCTG CCCCAACATG CGCCGGCTGA TGGAGCACGA CCCCGGGCGG
GTTGTGCCGG CCTACTGGGA AGGGCTGGGC CGGGTGATGC AGCTCGAGGT GCTGGCCGAT
GACCGGGCCG GTTTGCTGCG CGACATCATG GATGCCATTG CCTGGATGGG CAAAAGCGCC
ATGGGCGTAA ATTCGAGCCC CACCTCGCCG CTTTCTTCCC TGTTTCGCAT CAGCACCCGC
ATCGACTTAA GCGAGGGCGA GCAAAAAGCC CTGGATGAAC GCCTGCGCAA CGTGCCCAAC
GTGCGCTCGG TGCGTTGGTC ACAGGTGTTG TAG
|
|---|
| Protein sequence | MTEPTQPTAA PPSPTTHSAV EALWQRLEPY LHYLNDAAKA QVREALEFAY RAHEGQQRKS
GEPYIVHPVA VAQILAELGL DVETLLAGLL HDTIEDTEVR PEDIEERFGA AVRKIVEGET
KVSKLYKLAH AAQEDKHAEG KHAEDLRQMF IAMAEDVRII IVKLADRLHN LRTLEFMPPH
KQQRIARETL EIYAPLAHRL GIGQVKLELE DLSFRYLDPE NYQALERRLK SHRAEREAAV
QAAKEKLEQA LARDFILKQS IKKFEVTGRT KHLFSIWKKM EREGKTIEQI YDLLALRVIL
DPRQGPDPEE NSLREKQVCY HVLGLVHALW QPIPGRVKDY IAVPKPNGYQ SLHTTVIAVN
GLPLEVQIRT REMHRVAEFG VAAHWLYKEG VTDPEDLRRR VGWLKSIQDW QQEYSSSRDF
VEAVTKELLG DRVFVFTPKG KIINLPKGSS PVDFAYHIHT EVGHHMVGAK VNGRIVPLSY
ELQNGEIVEI LTAKTAHPSK DWIDYAKTRS AKQKIRMYFR AFERAETLEK GMRMLEKYFK
RRGLPRPLES QLEEVGRKLI KSSSPEDLYA AIATGRVAPQ QIARILVPRT ESAAARPKPV
KNTLGIRLES NLNVPIKLAS CCEPAKGDTI LGYITRGRGV TIHKAGCPNM RRLMEHDPGR
VVPAYWEGLG RVMQLEVLAD DRAGLLRDIM DAIAWMGKSA MGVNSSPTSP LSSLFRISTR
IDLSEGEQKA LDERLRNVPN VRSVRWSQVL
|
|---|
| |