| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2799 |
|---|
| Symbol | |
|---|
| ID | 8880912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 2837018 |
|---|
| End bp | 2838868 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Phosphoenolpyruvate carboxykinase (GTP) |
|---|
| Protein accession | YP_003508566 |
|---|
| Protein GI | 291297168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACC TCGAGTTCCC TCCTTACATC AAGAGTGAAC GGGTCAAGCA CTGGATCGCC
GAAGCAGTCG CGCTATGCAA ACCCGATGCG GTGCACTTCT GCGACGGCTC GGAAGAGGAG
TACAACGCCC TGTGCGATCA GCTCGTGGAG GCCGGCACCT TCATCCGCCT CAACCCCAAG
CTGCGCCCCA ACAGCTTCCT GGCCCGCTCC GACCCCAGCG ACGTCGCCCG GGTAGAAGAC
CGCACCTTCA TCTGCTCCAT CAACAAAGAA GACGCCGGCC CCACCAACAA CTGGGTCAAC
CCCAAAGAAA TGCACGCCAC CCTGCAGAGC CTCTTCGACG GCTGCATGCG GGGGCGCACC
ATGTACGTGG TGCCCTTTAG CATGGGGCCG CTGGGCTCCC CCATCAGCTA CATCGGCATC
GAGATCACCG ACTCGGCCTA TGTGGTGGTC AATATGCGCA TCATGACCCG CATGGGCAAG
GCCGTCTACG ACGTGCTGGG TGAGGATGGC GATTTCGTGC CCTGCATGCA CAGCGTGGGC
ATGCCCCTGG AACCCGGACA GAAAGACGTG CCATGGCCCT GCAACCCCAC CACCAAGTAC
ATCGTGCACT TCCCCGAAGA GCGCAGCATC TGGAGCTACG GCTCGGGCTA CGGCGGCAAC
GCCCTGCTGG GCAAAAAGTG CCTGGCCTTG CGGATTGCCA GTGTTATCGG GCGCGACGAG
GGCTGGCTGG CCGAGCACAT GCTGATTCTG GGGGTCGAAG ACCCTAAAGG CCAGAAAACC
TACGTAGCCG CCGCGTTCCC CAGCGCTTGC GGCAAGACCA ACTTTGCCAT GCTGATCCCG
CCCAAGCCCT TCCAGGAAGA AGGCTGGAAA GTCACCACGG TGGGCGACGA CATCGCCTGG
ATCAAGCCCG GCCCCGATGG GCGGCTCTAT GCCATCAACC CCGAAGCCGG CTACTTTGGG
GTGGCTCCGG GTACGTCCTA TAGCACCAAC CCCAACGCCA TGGAAACCAT CAAGGCCAAC
ACCATCTTCA CCAACGTGGC CCTCACCCCC GAGGGCGATG TCTGGTGGGA AGGCATGGAC
GGCCCACCGC CGGCCAGGGC CATCGACTGG CAGGGCAACG AGTGGACACC CGACTGTGGA
CGCAAAGCCG CCCACCCCAA CGCCCGCTTT ACCGCCCCGG CCAGCCAGAA CCCCGCCATC
GACCCCGAGT GGGAAAACCC CAAGGGTGTG CCCATCAAGG CCTTCATCTT TGGTGGGCGC
CGGGCCACAG TAGTGCCGCT GGTTTACCAG AGCTTCAACT GGAGCTTTGG GGTGTATCTG
GGCGCTACCA TGGGCTCGGA GATGACCGCT GCGGCCTTCG GGCAGATCGG CGAGGTGCGC
CGCGACCCCT TCGCCATGCT GCCCTTCATC GGCTATCACA TGGCCAGCTA CTTCAATCAC
TGGCTGGACA TGGGCCGCCG GGTGGTAGAC CCGCCCCGCA TCTTCAGCGT GAACTGGTTC
CGCAAGGACA AAGATGGCAA CTACCTGTGG CCCGGCTACG GCGAAAATAT GCGGGTGCTG
AAGTGGATTG TGGATCGGGC CAACGGGCGC GGGCGCGGCA CCGAATCGCC CCTGGGCTAT
GTGCCCCACT ACGAAGACCT GGACTGGCGC GGCCTGAACT TCAGCAAGGA GCAATTCCAG
GAGCTCATGG CCATCGACCG TGAGCTGTGG CTCAAGGAGA TCCTCTCGCA CGAGGAGCTT
TTCATCAAGC TCTACGAGCG GATGCCCAAG GAGTTCCTGG CCATGCGCGA GCTGCTGATT
TCCAACCTCT GGCGCTCCCC CGAACACTGG GACGTGGGCA GCTCGGAATA A
|
|---|
| Protein sequence | MSNLEFPPYI KSERVKHWIA EAVALCKPDA VHFCDGSEEE YNALCDQLVE AGTFIRLNPK
LRPNSFLARS DPSDVARVED RTFICSINKE DAGPTNNWVN PKEMHATLQS LFDGCMRGRT
MYVVPFSMGP LGSPISYIGI EITDSAYVVV NMRIMTRMGK AVYDVLGEDG DFVPCMHSVG
MPLEPGQKDV PWPCNPTTKY IVHFPEERSI WSYGSGYGGN ALLGKKCLAL RIASVIGRDE
GWLAEHMLIL GVEDPKGQKT YVAAAFPSAC GKTNFAMLIP PKPFQEEGWK VTTVGDDIAW
IKPGPDGRLY AINPEAGYFG VAPGTSYSTN PNAMETIKAN TIFTNVALTP EGDVWWEGMD
GPPPARAIDW QGNEWTPDCG RKAAHPNARF TAPASQNPAI DPEWENPKGV PIKAFIFGGR
RATVVPLVYQ SFNWSFGVYL GATMGSEMTA AAFGQIGEVR RDPFAMLPFI GYHMASYFNH
WLDMGRRVVD PPRIFSVNWF RKDKDGNYLW PGYGENMRVL KWIVDRANGR GRGTESPLGY
VPHYEDLDWR GLNFSKEQFQ ELMAIDRELW LKEILSHEEL FIKLYERMPK EFLAMRELLI
SNLWRSPEHW DVGSSE
|
|---|
| |