Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2694 |
Symbol | |
ID | 8880806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2728374 |
End bp | 2728925 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | protocatechuate 3,4-dioxygenase subunit alpha |
Protein accession | YP_003508463 |
Protein GI | 291297065 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00413349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.341471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCAC AGTATCCCAG CCAGACCGTG GGCCCTTTCT TTGCTTTTGC CCTGGTGCGC GAGGGCGGCA ACGTTCTGGT CAACGAGCAG ACCCTGGGGG AGCGCATTAC CCTGAAGGGC CGGGTGCTCG ACGGGGACAA CCAGCCGGTG GACGACGCCC TGGTGGAAAT CTGGCAGGCC GACGCCCAGG GGCGCTTCCG CCACCCGGCC GACCCCCAGC ACGCCCAGGC CGACCCCCAC TTCAAGGGCT TTGGCCGTTC GGGCACCACT GGCGAGGGTT TTTGCTTCCA GACCATCAAG CCGGGGCCGG TTCCGCCCAG CCCGGTGCCC TGTATAGCCG TCCGGGTGTT CGCCCGCGGC ATGCTGATTC ACGCGGTCAC CCGGGTGTAC TTCTCCGACC ACGACAACAC CCAGGATCCG GTCTTTGCCG GGCTCGACCC CGTGCGGCGC CAGACCCTGG TGGCCCAGCG CTGCGAGCTG CCCGGCGGGG TGGTGTACCG CTGGGATATA CGCCTGCAGG GCGAGGGCGA GACGATCTTT TTCGATTTGT AA
|
Protein sequence | MRAQYPSQTV GPFFAFALVR EGGNVLVNEQ TLGERITLKG RVLDGDNQPV DDALVEIWQA DAQGRFRHPA DPQHAQADPH FKGFGRSGTT GEGFCFQTIK PGPVPPSPVP CIAVRVFARG MLIHAVTRVY FSDHDNTQDP VFAGLDPVRR QTLVAQRCEL PGGVVYRWDI RLQGEGETIF FDL
|
| |