Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2689 |
Symbol | |
ID | 8880801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2724310 |
End bp | 2725497 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_003508458 |
Protein GI | 291297060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000331787 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.185218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAA TACGTCGCAG GCAGTTGATC AAGGCAGGGC TCGGGCTAGC GGGGCTGGCA GCCTCAAGCC GCTTTTCCTT CAGCCTGGCC CAGCAGGAAC CCATCCGCAT CGGGGTGGTG CTCTCCTACT CGGGGCCATA CGCCCGGCTG GGCCAGGAGA TCACCCGCGG GATGGAGCTC TACCTGGAAA AAGTGGGCTA CCAGGCGGGG GGCCGGCGCA TCCAGCTCTT GAAAGAGGAC GAGGAGGCCG ATCCCGCGGT GGCGGTGCGC AAGGTGCGCA AGCTGGTCGA GCAGGATCGC GTCAACCTGC TGAGCGGCAT TATCCTTTCG TCCTCGGCCT ACGGCATCCG GGACTACGTG CACGAGCGGC AGATTCCCCT GGTCATCGCC AACGCCGCGG CCAACGGCAT CACCCGCGAA CGCCGGAGCC CCTACATCTT CCGCACCTCC ATCAGCGCCT GGCAGCAGCA CTACCCCATG GGCCCCTGGG TGGCCCGCAA CGTCGGGAAA AAGGTCTTTT TGCTGGCCCT GGACTACGCC TTCGGTAAAG AAGCTACCGC CGCCTTCAAA GAGGGCTTCC TGCAGGCCGG CGGGGAGCCG GTGGCCGAGC TGTACACCCC CCTGGGCAGC ACCGACTACA GCGCGGTGAT CTCGCGCATC GCCGCGGCCC GCCCGGAAGC GGTGCACGCG GTGCTTTCCG GTAGCGATGC GGTCATCTTC CTGCGCCAGT TCATCCAGTT TGGCCTCAAC CGCAGCATTC AGCTTGCGGT AAGCGGCGAG GTAACCGATG AGAACGTGCT CGAGGCCATC GGGGATGCCG CTTTGGGGGC CAAGAGCGCC GACCACTGGG TCTATACCCT GAACAACAGC GCCAACCGGG AGTTCATCCA GGCCTACCGG CAGAAATTCA ACGCGGTGCC CAACCACTTT GCCGTGCGGG GCTACGACGC CATGCAGTTT ATCGTGGACG CTATCAACAC CGTGCAGGGC GATTTGAGCA ACCGCCAGCG GCTGCTTGGG GCCATTGAGA GCGCGAAAAT AATCAGCCCG CGGGGCTTTG TGCAGATGGA TCCGGAGACC AACAACGTCA CCCAGCACGT CTACGCCCGG GAAGTAGCCC GCATCGATGG GGTGCTGACC AACCGCCTGC TGGCCGACCT GGGCACCATC CGCGACCCTG GTAAGTAA
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Protein sequence | MATIRRRQLI KAGLGLAGLA ASSRFSFSLA QQEPIRIGVV LSYSGPYARL GQEITRGMEL YLEKVGYQAG GRRIQLLKED EEADPAVAVR KVRKLVEQDR VNLLSGIILS SSAYGIRDYV HERQIPLVIA NAAANGITRE RRSPYIFRTS ISAWQQHYPM GPWVARNVGK KVFLLALDYA FGKEATAAFK EGFLQAGGEP VAELYTPLGS TDYSAVISRI AAARPEAVHA VLSGSDAVIF LRQFIQFGLN RSIQLAVSGE VTDENVLEAI GDAALGAKSA DHWVYTLNNS ANREFIQAYR QKFNAVPNHF AVRGYDAMQF IVDAINTVQG DLSNRQRLLG AIESAKIISP RGFVQMDPET NNVTQHVYAR EVARIDGVLT NRLLADLGTI RDPGK
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