Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2660 |
Symbol | |
ID | 8880772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2698385 |
End bp | 2699269 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003508430 |
Protein GI | 291297032 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00097283 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCCCTGA CCCAAACAGC CCCCAAACCC AGCACCGACA CCCCAACCCG CTTGGCAGTC AGGCGGTTCA TGAGATCGAG TTCTGGCAAA ATCGGACTGG TAATGGCGGT ATTGTTGGTG CTGCTGGCCT TGCTGGCACC CGTACTCAAG CCCTACGACC CCACCACCGA CCGTGATTTT ATAAACCGTT TGAAACCCCC TTCAGCAGAG CGGCTTTTTG GTACCGACAA TCTGGGACGC GATGTGTTTA CCCGGGTAAT TCACGGCAGC CGAATCTCGC TCCAGGTGGG GCTAATTGCC GTAGCCCTGA GCCTGGTAGT AGGCACCTTG TTGGGGCTGA TGGCTGGCTA TTTCCGGGGC TATCTTGAGA TGCTTATCGG ATGGATTACC GATATTTTGC TGGCCTTTCC CAGTACCCTG CTGGCCATTG CCATCGTGGC GGTGGTGGGC CCCAGTCTAA CCAACGCCAT GATCGCAATT AGCATCACCC AGATTCCGGT TTACATCCGG CTGGCCCGCA GCGTGGTGCT TTCGGCCCGT GAGCTCGATT ACGTGCAGGC TGCCAATGCG CTGGGAGCCC CCAACCGGCG GATTCTACTG CGCCACCTGC TCCCCAATGC CTTGCCTCCC ATCATCGTAC AGGCCACCCT TTCCATCGGC ACTGCTACCC TCGAGACCGC CGCGCTGGGT TTCCTCGGCT TGGGGGCTCA GCCGCCCGCA CCCGAGTGGG GGGCCATGTT GTCTGATGCG TTCCGGGGCG GCTATGCTCT CAACGCCCCC TGGACAATGG TTTTCCCCGG TCTTTTCATC ATGCTGACCG TACTGGCCTT CAACCTGCTC GGGGACGGCT TACGCGACGC CCTCGACCCC AGGGCCCTGC GGTAG
|
Protein sequence | MALTQTAPKP STDTPTRLAV RRFMRSSSGK IGLVMAVLLV LLALLAPVLK PYDPTTDRDF INRLKPPSAE RLFGTDNLGR DVFTRVIHGS RISLQVGLIA VALSLVVGTL LGLMAGYFRG YLEMLIGWIT DILLAFPSTL LAIAIVAVVG PSLTNAMIAI SITQIPVYIR LARSVVLSAR ELDYVQAANA LGAPNRRILL RHLLPNALPP IIVQATLSIG TATLETAALG FLGLGAQPPA PEWGAMLSDA FRGGYALNAP WTMVFPGLFI MLTVLAFNLL GDGLRDALDP RALR
|
| |