Gene Mrub_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2556 
Symbol 
ID8880666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2602029 
End bp2602958 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_003508326 
Protein GI291296928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00317334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTC CGCTTCTGAC CCTGCTTGCC AGCTTGGCTG TGTTGCTGGG GGCAGCCCGC 
TTACTCACCC AGTCATCGGA GCGCATAGGC CTCGCCCTGG GGCTGTCCAG CTTTATGGTG
GGCGTGGTCA TCGTGGGGGT GGGCACCTCA CTGCCCGAGC TGGTGACCGG GCTTTTTTCG
GTGCACCAGG GGGTTTCGGA GATTGTGGGC GGCAATGTGC TGGGGGCCAA CGTATCCAAC
CTGCTGCTCA TTTTGGGGGT GAGCGCGGTG TTTTCGGTGC TGCGCCCGGT GTATCTGGGC
GAGGCGTATA TCGCCATTGA CCTGCACTTT CTGGTGGGCT CGGCGTTTGT GCTGGGGGTG
GTGATGTTCG ACGGGCAGGT GGGCCGGGTG GAGGGCCTGT GCCTGCTGGC GGTGTATGGG
GTGTATGTGG TTTATCTTCT CAGGGAAGGC AGCAGTAAAG CGACCGGGCA GGCTCGAGCC
CCCCTGGCCC TGCGCGACCT CCTGATTGTG GGACTGGGCG CGGTGGGTGT CTACGTTGGG
GCCGACTGGA CGGTGCGCAG TCTGCAAGGA CTGGCAGCCA GCCTGGGTGT GCCAAATGCC
ATCGTGGCGG TTACGCTGCT GGCTTTGGGC ACAACCCTGC CCGAGCTGGT GGTGAGCCTC
ACCGCCGCGC GCCAGGGGAA GGCTTCCATG GCGGTGGGCA ACATCCTGGG CTCGTGCGTT
TTCAATGCGC TGGTGGTGGT GGGGGTCAGC GCGATCTACG GCACCGTCAA AGCGACGCCC
GAACTAACCG GATTCGCCCT GCCCTTTGCG GTGGGGGCTT CGCTTTTGTT CTATTTGCTG
GTGCAGGATC GGCGCATCTC GAGTTGGGAG GGGATGCTGT TTTTGGTGAT GTACGGGTTG
TTTGTGCTCG AGGTCAGCGG CCTGGCTTGA
 
Protein sequence
MTVPLLTLLA SLAVLLGAAR LLTQSSERIG LALGLSSFMV GVVIVGVGTS LPELVTGLFS 
VHQGVSEIVG GNVLGANVSN LLLILGVSAV FSVLRPVYLG EAYIAIDLHF LVGSAFVLGV
VMFDGQVGRV EGLCLLAVYG VYVVYLLREG SSKATGQARA PLALRDLLIV GLGAVGVYVG
ADWTVRSLQG LAASLGVPNA IVAVTLLALG TTLPELVVSL TAARQGKASM AVGNILGSCV
FNALVVVGVS AIYGTVKATP ELTGFALPFA VGASLLFYLL VQDRRISSWE GMLFLVMYGL
FVLEVSGLA