| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2357 |
|---|
| Symbol | |
|---|
| ID | 8880466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2405426 |
|---|
| End bp | 2407762 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent nuclease subunit B |
|---|
| Protein accession | YP_003508128 |
|---|
| Protein GI | 291296730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.449533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTCC TGGTTGGCCC CCCGGCTTCC GGCAAGACCA CCCGCCTGCT CGAGCTGGCC
CAGTCTTTTT TGCAACAGCG CCAACGGGTC TGGTGGGTGT GCCTGCCCGC GCAAAAAGCC
TACGTCTACC GCCGGGCCAC CCAAAAAGGC GCGGTGCTGG GCCTCGAGGT GCTCTCCTCG
CAGCAGCTCT ACTACCGCTT GCTGGCGGCC AGCTATGGCC TGAAGCCCAT CCTGACCGGG
CCGGGCCGGG TGGCGCTGGT GGGGGAGGCC CTGCAGAATT CAGAAAATCC AATTCCCAAG
CCCGGTGAGG CCCGCCTGTT TGCCCGCGCC ATCGCCGAGG CCAAGCGCAA CGGGGTAAAA
CCGGAGGAGA TTCCCAACCA GAGCCCCGAG ACCCGGCGCT TGCGGCAGGT ATATGCCCGC
TACGAGGAGC TCAAGACCAC CTTGGGCCGC TGGGACTACG ACGACTTTCG CTCGGGGGCG
CTGGAACTGC TGGCGCAGGG GCCGGTGCAG CTCGAGCCCG ACCTGGTGGT GGTGGATGGC
TTTCGCGAAC TGGGGGTGCA GGAGTTGCGG CTGTTGCGGG CGCTGTCCCG CTATGTTCCG
GTCTGGGTTA GTTTACCCGA AGCCCCGCCC GGACTCGCCC CTGATGAGAC ACTGGAATCG
CGCCCAATTC CGGCCCAGGT TTACCGCGCC CAGAACCCGG TGAGCGAGGC CCGCTGGGTG
CTGCGCGCCA TCAAGCGCGA CCTGGCGCAG GGCCTGGCGG CCCTGGATGT GGCGGTGGTG
GCGCCGGAGT CGCGGATTCC TGCCCTGCTC ACCCTGGCCG ACGAGTATGG CCTGCCCCTG
GTGGATTACC GGCTTCGCAC CGCCGCCGAC ACCCCCGAGG GGCGGCTGTT GCTCGAGCTC
CTCGAGCTGC CCGACTACCC CACGCCCAGC CGCCTGATGG CCGTGCCCGA CCTGGCCCCG
CTGGGCCGAG CGGCGCTCGA GCGCGGCCTG GTGGGCCTCG AGGCCACCAC CCGCCTGGCC
GCTGAGCTGG GGATGCAAGA CCTGTGGGCG GCCTGGCTCT CGCGCCTGAA GCCCCCCGGT
GAAGCAGGCT CGTTCTTCGA AGGCCGGGGG TGGAACCACA GCTTCCACCC CTCGCTGGCC
TGGGCCGAGG AGCTGCTGGA CTCGCTGCCC GAGGTGCGCC ACAGCCCCCG CCGGGTCAGC
CTGCTGGAAC GGGCCTACGA AGCCCACCGC ATCGCCCTGG GCCCCGATTT CCGCCACTGG
TGGGCGGCCT TGCTGGCCGA GACCTACGAG CCCCAGCGCC CGCCGGGCGG GGTGGCGGTG
CTCACGCCCA ACCTGGCCTC GGGGCAGCGC TGGAAGAAGC TCTATCTGAC CTATGCGGTG
GAGGGGGCCT ACAACACCGG CGAGCAGGAG GACTACTTCG TCCCCGAGGA GTTGCGGGTG
GGCCTCGAGC AAGCCCTTCA AGCTGCGGGG TTGCCCAAAC GCTTTTTGGG GCGCGACCGC
CTGCTCTTGC AGGAGCTCAA AACCCGCGCC GACGAGGTGA TCATCACCTA CCCCGAGGCC
AGCCAGGAGG GGCCGCTGGA ACCCGAGCCC ATGCTGGTGG GCAGCACCCC GCCCTACCTG
CCCAAGCTGC CCCCGGCCAG CCGGCTCGAG CTGGCCCAGC AAGGAGGCTA CCGGGCCCCC
TTGGGTCGGG CGAGCCTGGG GGCGCCTCGG GTGGAAGACC TGCGGCGCTA CCGCGAGTGC
AGCTTTCAGT TCTGGGCCCA GCAGCTCATC CCCAAGGACG AGCGACTGCT GGAGTGGTGG
CAGCAGTGGA CGCACGAGCT GCGCAAGGCC GAGAAGCTGG TGCCGGCCCG CCTCGAGGCC
CTGGCCCGGC AGTTCCCCCA GACCGAGGGC TGGATGCGCC ACCACTACGC CCTGCTGAGC
GAGCTCAGCC TGGGTTTCAG GCTGAATGGT GCGGGGCTGG AAGCGCGGCT GGACGGGGTT
TTGCGCAAGG GCGGCGAGGT GCACATCTAC CGCTTTGTAG CCCCCGAGAC CCCCGCAGAA
AAGGCCGACC AGCAGGTGCG CGAGCGCTGG AGTGAGCGCT GGGCCGCCGG TTACCTGCTC
TCGACTTTCC CGAAGCGCGT CCAGCGCGTT TATCTGTGGG CCTGGCCGGT GCTGGGCGAC
CCGCTGCTGG TGTACGGCAA GCCCATCGAA CGGCTCTGGG GGGCGCTCGA GAACCTACTG
GCCAAAGCGC AGGAGACCTA CGCCCAGTAC AAAACCGGGG TGGTGGAACC CAACCCCGGT
TTCCGTTGCC GTAGCTGTGG TGTTCGGGAC GTCTGCCGTG AGGCGCAGTA CAGTTAG
|
|---|
| Protein sequence | MHLLVGPPAS GKTTRLLELA QSFLQQRQRV WWVCLPAQKA YVYRRATQKG AVLGLEVLSS
QQLYYRLLAA SYGLKPILTG PGRVALVGEA LQNSENPIPK PGEARLFARA IAEAKRNGVK
PEEIPNQSPE TRRLRQVYAR YEELKTTLGR WDYDDFRSGA LELLAQGPVQ LEPDLVVVDG
FRELGVQELR LLRALSRYVP VWVSLPEAPP GLAPDETLES RPIPAQVYRA QNPVSEARWV
LRAIKRDLAQ GLAALDVAVV APESRIPALL TLADEYGLPL VDYRLRTAAD TPEGRLLLEL
LELPDYPTPS RLMAVPDLAP LGRAALERGL VGLEATTRLA AELGMQDLWA AWLSRLKPPG
EAGSFFEGRG WNHSFHPSLA WAEELLDSLP EVRHSPRRVS LLERAYEAHR IALGPDFRHW
WAALLAETYE PQRPPGGVAV LTPNLASGQR WKKLYLTYAV EGAYNTGEQE DYFVPEELRV
GLEQALQAAG LPKRFLGRDR LLLQELKTRA DEVIITYPEA SQEGPLEPEP MLVGSTPPYL
PKLPPASRLE LAQQGGYRAP LGRASLGAPR VEDLRRYREC SFQFWAQQLI PKDERLLEWW
QQWTHELRKA EKLVPARLEA LARQFPQTEG WMRHHYALLS ELSLGFRLNG AGLEARLDGV
LRKGGEVHIY RFVAPETPAE KADQQVRERW SERWAAGYLL STFPKRVQRV YLWAWPVLGD
PLLVYGKPIE RLWGALENLL AKAQETYAQY KTGVVEPNPG FRCRSCGVRD VCREAQYS
|
|---|
| |