Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2273 |
Symbol | |
ID | 8880382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2322712 |
End bp | 2323503 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_003508046 |
Protein GI | 291296648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000217948 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGAAGACC TCGAGCTATC CACACCAACC AACCTGAGGC GCATCCTGCT CACCCTCGAG TACGACGGCA GCGGCTTCGC TGGCCTGCAA ACCCAGGCCC AGGGCGAACG CACGGTGCAG CAGGAACTCG AGGCCGCCCT TAGCCAAATT CCTGGTGCGA GGCCCAAAAT CTGGCCCTGT GGCCGCACCG ATGCCGGGGT GCACGCCCTG GCCATGCCGG TGCATTACGA CACCCTGGAC AACATCCCCA CCGAAAAAAT CCCCCACGCC CTCAACACCC TCCTGCCCCC CGATATCCGG GCCCTGGCCG CGCAGGAAGT CCCGGCGGAC TTTCACGCCC GCAAAAGCTG CCACTGGCGC GAGTACCGCT ACCGCATCCT GCAGCGCCGC ATGCCCCCGG CCTTGGATCG TCACCGGGTC TGGTGGATTC CCCACTCGCT CAACCTGATC CCCATGCGGC ATGCGCTGGA ATGCCTGGTG GGCACCCACG ACTTCAAAGC TTTCGCCGTC AAGGAGGAGC GGGCTACGGT GCGTGAAATC TACCGCGCCC ACCTCGAGGT CTGGCCCACC GAGGGGGGGC GGGAGATTTG GATCGAGTTT GTGGGTTCAG GCTTTTTGCG CGGCCAGGTG CGCAGCATGG TGGGCACCCT GGTAGAGATT GGACTGGGCA AGCGGGACTC GAGCAGCATC CAGAGCCTGC TGGCCAGCGG CAGCCGCAAA GACGCCGGCC CCACCGCCCC CGCCCAGGGC CTGTACTTCG TACGGGCCGG CTACCAGCCC TACCGCCAGT AG
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Protein sequence | MEDLELSTPT NLRRILLTLE YDGSGFAGLQ TQAQGERTVQ QELEAALSQI PGARPKIWPC GRTDAGVHAL AMPVHYDTLD NIPTEKIPHA LNTLLPPDIR ALAAQEVPAD FHARKSCHWR EYRYRILQRR MPPALDRHRV WWIPHSLNLI PMRHALECLV GTHDFKAFAV KEERATVREI YRAHLEVWPT EGGREIWIEF VGSGFLRGQV RSMVGTLVEI GLGKRDSSSI QSLLASGSRK DAGPTAPAQG LYFVRAGYQP YRQ
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