Gene Mrub_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2206 
Symbol 
ID8880315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2258171 
End bp2259247 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content66% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003507979 
Protein GI291296581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.33492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTT TAGCCTTTGT CATCGTATGG CTGGCCCCGG TGCTGGCGTT TCCGCGCCTG 
GGTCTGCACG AAGGCTACAC CCGCCTGGTC TTCGACCTCG AGGCCCGAAC CCAGTACCAA
CTCGCCCAGT CCCCCGACAC CCTCACCCTT CGCTTTAGCG GCATCGGCGT GGAGGCCGCC
GATGTGGATG TGAGTTCACC CCAGGTGGCC TCCTACCAGG TGGTGGTAGC CGGCAACGGC
GCCACGGTGT TCGTGCGCCT GAAGCCGAAC GTAGAGGTCA AGACCGCACT TCTGGACGAC
GGAAACCGGC GTCGCCTGGT GGTGGATGTG CTCACCAGGG CCCCCCGGCC CAGCCCCCCG
GTGCAGGCCC AACCCCAGCC CCCCCGGCCC CGCCCCCAGC CCAGGGTGGT GGTGATAGAC
CCCGGCCACG GCGGTGTTGA TTCTGGGGCG GTGGGCTATG TGGTGGAGAA GGAGGTGACC
CTCGACCTGG CCCTGCGCCT GCGGCAACTG CTGCAAAAAG AGGGCATCGA GGTCATTCTG
ACCCGCAGCA GCGATACCCA CCTTTCCCCT GACAAGGCCA CCGACCTGGG CCTGCGGGCC
GAGATGGCCA ACTCCAAGCG CAACCTGTTT ATCTCCATCC ACGTCAACAG CGCACCCAAC
GCGGCCCAGG GTATCGAGAC CTACTACTTT GGCAGCACCC TGGATCAGAG CCTGCTGGCC
CAGGTGATCC GTGAGAACGG CGGGGGCGAG CTGGGCCAGC GCCTGACCCG CGAGGCCCAG
AGTGTGGGCG AACGCCTGGT GCGCGACCTG ATCGCCCAGT CCAACCTCAA GTTTTCGCGG
CAACTGGCCC ACTATGTGCA GGGGGCGTTG TTAGAGGCCA CCGGCGCGGT AGACCGGGGG
GTGCGCCAGG CGCCTTTTTA CGTGATTCGC AACGCCCGCA TCCCGGCCAT TCTGGTGGAG
GTGGGCTTTG CCAATCATCC CGTTGAGGGC CGCCGCCTCC AGACCAACGA GTACCGCCAG
ACCCTGGCCC TGGCCCTGGC TCGAGGCATC CTGCGCTTTT TAAACAACGG GGAGTAG
 
Protein sequence
MRLLAFVIVW LAPVLAFPRL GLHEGYTRLV FDLEARTQYQ LAQSPDTLTL RFSGIGVEAA 
DVDVSSPQVA SYQVVVAGNG ATVFVRLKPN VEVKTALLDD GNRRRLVVDV LTRAPRPSPP
VQAQPQPPRP RPQPRVVVID PGHGGVDSGA VGYVVEKEVT LDLALRLRQL LQKEGIEVIL
TRSSDTHLSP DKATDLGLRA EMANSKRNLF ISIHVNSAPN AAQGIETYYF GSTLDQSLLA
QVIRENGGGE LGQRLTREAQ SVGERLVRDL IAQSNLKFSR QLAHYVQGAL LEATGAVDRG
VRQAPFYVIR NARIPAILVE VGFANHPVEG RRLQTNEYRQ TLALALARGI LRFLNNGE