| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2172 |
|---|
| Symbol | |
|---|
| ID | 8880281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2222512 |
|---|
| End bp | 2223006 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_003507946 |
|---|
| Protein GI | 291296548 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.711656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAA GAACCCTGCT GGTAGTCGGT AGCCTAGCCC TGGCCGCGCT GGGCCTCACC
CTGACCAACG CCCAGAGCAC CGCCCAGAAC CAGACCATTG CCCAGATAGT GGCCACCAAC
CCCAACTTCA GCACCCTGCT GGCCGCGGTG CAGGCGGCGG GCCTGGTGGA AACCCTCTCG
GGCCCAGGCC CTTTCACGGT GTTTGCGCCC ACCAACGAAG CCTTTGCCAA GATCCCCAAG
GCCGACCTGG ACAAGCTTTT GGCCGACAAA GCCGCCCTTA CCAAAGTGCT CACCTACCAC
GTGGTAGCGG GGCGGGTGCC CTCGAGCCAG GTGGTCACGC TCAAGGAGGC CAAAACCGTG
CAGGGCCAGA GCGTGACCAT CGAGGTCAAG GATGGCAAGG TGATCCTGAA CGGTAACTCG
ACCGTTACTG TGGTGGATAT CCAGGCCAGC AACGGCATTA TTCACGTGAT TGATACGGTT
TTGCTACCCA AATAG
|
|---|
| Protein sequence | MKLRTLLVVG SLALAALGLT LTNAQSTAQN QTIAQIVATN PNFSTLLAAV QAAGLVETLS
GPGPFTVFAP TNEAFAKIPK ADLDKLLADK AALTKVLTYH VVAGRVPSSQ VVTLKEAKTV
QGQSVTIEVK DGKVILNGNS TVTVVDIQAS NGIIHVIDTV LLPK
|
|---|
| |