Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2028 |
Symbol | |
ID | 8880137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2067789 |
End bp | 2068532 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_003507803 |
Protein GI | 291296405 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.667187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAGCG CTGAAACTGG GGGAATACTC CTGACTGGCG GAACGGGCCG GCTGGGAACG GCGCTGCGGG AGTTGCTGCC TGAGCTTATC GCACCCAGTC GCGCAGAGCT GGATATCACC GACCCATCCA GCGTTGAGCG GGCTTTTGCG AAGTATCAGC CCAAGGTCGT GGTGCATGCG GCGGCTTATA CCAACGTGGC CGGGGCCGAG ATCGAAAAAG CCCTTTGCTG GAGGGTGAAT GTGGAGGGTA CCCGTAACCT GGTTCGGGCT GCCCTGGGGC ACGACCTGCA CTTTGTCCAC ATCTCAACCG ATTATGTGTT CTGGGGGGAT GTGGGGGGCT ACCGGGAGGA AGACCCGGTG GGGCCGGTGC GCAACTACTA CGCGCTTTCC AAGCTGGTAG CCGAGGAGCT GGTGCGGCTG CTTTCACGTC ACCTGATTAT CCGCACCTCT TTCCGCCCTT CGCCCTGGCC GTACCCCACG GCTTACACCG ATCTTTATAC CAGCCAGGAC TACCTTGAGG TCATCGCCCC CCAGATTGCC CTGGCCCTGC AAAACCTCCA TCGCATCCCC TACGCCACCC TCCATATTGC CACTGAGCGC AAGTCGGCCT ACGAGCTGGC CCTGCGCACC CGGCCCGCTG TAGAGCCGGC CCGCCGCCAG GAGGCCTTGG TGGCGCTGCC CGAGGACGTA TCGCTGGATA TCAGCCGCTG GCGAAGCCTG CTCAGTAGCT GGGATTCTGC GTGA
|
Protein sequence | MGSAETGGIL LTGGTGRLGT ALRELLPELI APSRAELDIT DPSSVERAFA KYQPKVVVHA AAYTNVAGAE IEKALCWRVN VEGTRNLVRA ALGHDLHFVH ISTDYVFWGD VGGYREEDPV GPVRNYYALS KLVAEELVRL LSRHLIIRTS FRPSPWPYPT AYTDLYTSQD YLEVIAPQIA LALQNLHRIP YATLHIATER KSAYELALRT RPAVEPARRQ EALVALPEDV SLDISRWRSL LSSWDSA
|
| |