Gene Mrub_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2028 
Symbol 
ID8880137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2067789 
End bp2068532 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003507803 
Protein GI291296405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.667187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG CTGAAACTGG GGGAATACTC CTGACTGGCG GAACGGGCCG GCTGGGAACG 
GCGCTGCGGG AGTTGCTGCC TGAGCTTATC GCACCCAGTC GCGCAGAGCT GGATATCACC
GACCCATCCA GCGTTGAGCG GGCTTTTGCG AAGTATCAGC CCAAGGTCGT GGTGCATGCG
GCGGCTTATA CCAACGTGGC CGGGGCCGAG ATCGAAAAAG CCCTTTGCTG GAGGGTGAAT
GTGGAGGGTA CCCGTAACCT GGTTCGGGCT GCCCTGGGGC ACGACCTGCA CTTTGTCCAC
ATCTCAACCG ATTATGTGTT CTGGGGGGAT GTGGGGGGCT ACCGGGAGGA AGACCCGGTG
GGGCCGGTGC GCAACTACTA CGCGCTTTCC AAGCTGGTAG CCGAGGAGCT GGTGCGGCTG
CTTTCACGTC ACCTGATTAT CCGCACCTCT TTCCGCCCTT CGCCCTGGCC GTACCCCACG
GCTTACACCG ATCTTTATAC CAGCCAGGAC TACCTTGAGG TCATCGCCCC CCAGATTGCC
CTGGCCCTGC AAAACCTCCA TCGCATCCCC TACGCCACCC TCCATATTGC CACTGAGCGC
AAGTCGGCCT ACGAGCTGGC CCTGCGCACC CGGCCCGCTG TAGAGCCGGC CCGCCGCCAG
GAGGCCTTGG TGGCGCTGCC CGAGGACGTA TCGCTGGATA TCAGCCGCTG GCGAAGCCTG
CTCAGTAGCT GGGATTCTGC GTGA
 
Protein sequence
MGSAETGGIL LTGGTGRLGT ALRELLPELI APSRAELDIT DPSSVERAFA KYQPKVVVHA 
AAYTNVAGAE IEKALCWRVN VEGTRNLVRA ALGHDLHFVH ISTDYVFWGD VGGYREEDPV
GPVRNYYALS KLVAEELVRL LSRHLIIRTS FRPSPWPYPT AYTDLYTSQD YLEVIAPQIA
LALQNLHRIP YATLHIATER KSAYELALRT RPAVEPARRQ EALVALPEDV SLDISRWRSL
LSSWDSA