Gene Mrub_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2015 
Symbol 
ID8880124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2053963 
End bp2054949 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003507791 
Protein GI291296393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000268441 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAAAA AAGCTGTTCT CGTAACCACC CTTCTGGCCG TACTAGGTTT GGCGCAGGCC 
CAGCAACAGA GCCTTACTGT TTACACGGGC CGCGGACAAG GGTTGGTGGA GCCGCTGGTC
AGACAGTTTG AAGCCGAGAC CGGTATTAAG GTCAACGTGC GCTATGGGCG CGATGCCGAG
ATTCTGGCCG CGCTACAGGA AGAGGGCAGC CGCAGCCCGG CCGATGTCTT CTGGGCCAAC
ACCGCGGGGG CCCTGGGTGT GGCTTCCGAA CGGGGGCTGC TGGTGCGCCT GGGTGATACC
ATCACCCGCA CGCCGGCCTA TTTTGTACCG GCCAGCCGCC AGTGGGTGCC CTTGACCGTC
CGCTTGCGGG TGCTGGCCTA TGACCCCAGC CGGGTCAAGC CCGAAGACCT GCCCAAAAGC
ATTATGGATC TGCCCAAGTT GACCCAGTAC AAAGGGCGGA TTGGCTGGAC ACCGACCTAC
AGCAGCTTCC AGGACATGAT TGCGGCCATG GTGGCGCAGT ATGGCGAGGC CCGCACCCGG
CAGTGGATTG CCGATATGAA GGCCCTCGAG CCCAAAGCCT ACGCCTCCAA CCCGGCCATG
ATGGAGGCCA TCCGGGCTGG CGAGATCGAC CTGGGCTCGA CCAACCACTA CTACATTCAG
CGCGTGGCCC GGGCGGGGCA GCGCATTGCC ACTTACTACT TTGCTGATGG TGATGTGGGC
GGCCTGGCCC TGGTGACCGG GGCTGGCATT CTCAAAACCA GCAAAAACCC GGCGGCGGCC
AACCGTTTCT TGCTGTGGCT GCTTTCGGCC AAGGGCCAGC AGTTCTTCGC TAGCGAGATC
ATCGAGTATC CGGTGACCCA GGGGGTTGTG CTCAGCTCGA GCCTGCTGCC CATCAACCAG
GCGGTGGCCA AGAGCCCCAA AGTGGACTTT GAAAAGCTAC CCCTCGACAC CGCGCTCAAG
CTGCTGCGCG AGGCCGGGTT GCTCTAA
 
Protein sequence
MRKKAVLVTT LLAVLGLAQA QQQSLTVYTG RGQGLVEPLV RQFEAETGIK VNVRYGRDAE 
ILAALQEEGS RSPADVFWAN TAGALGVASE RGLLVRLGDT ITRTPAYFVP ASRQWVPLTV
RLRVLAYDPS RVKPEDLPKS IMDLPKLTQY KGRIGWTPTY SSFQDMIAAM VAQYGEARTR
QWIADMKALE PKAYASNPAM MEAIRAGEID LGSTNHYYIQ RVARAGQRIA TYYFADGDVG
GLALVTGAGI LKTSKNPAAA NRFLLWLLSA KGQQFFASEI IEYPVTQGVV LSSSLLPINQ
AVAKSPKVDF EKLPLDTALK LLREAGLL