Gene Mrub_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2006 
Symbol 
ID8880115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2045451 
End bp2046824 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content67% 
IMG OID 
ProductUDP-N-acetylmuramate/alanine ligase 
Protein accessionYP_003507782 
Protein GI291296384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.470243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATT ATCACCTGAT GGGCATTGGG GGAATAAGCA TGAGCGGGCT GGCCCGCATC 
CTGCGCAAGG ACGGGCATCT GGTGAGCGGC TGCGACAGCC AGCCCTCCGA CCTGACCCGG
CAGCTCGAGC GCGAGGGCAT CCGGGTCTAC CAGGGCCACA GCCCCGAACA CCTGCACGCC
GTGGACGTGC TGGTGGCCTC CACCGCCATC AAGGACAGCG AGCCCGAGCT GGTCACCGCC
CACACCCTGG GCATCCCGGT CTGGCGGCGG ATCCAGGTGG TAGCCGAGAT TTTGCGCGGT
GGCTTCAGCC TGGGCGTCAC CGGCTCGCAC GGCAAAACCA CCACCACCTC GATGCTGGCT
AGCATTTTTA TCGCCGCTCA GACCGACCCC ACCGTGCTGC TGGGGGCCGA GCTGGGCCTG
ATCGGTGGCA GCGCCAAGGT GGGCTCGGGC CGGTATCGGA TTGCCGAGGT GGACGAGTCC
GACCCCTTGT TCCGTTTTTT GGAGCTGGAC GTGGCGGTGC TGACGAACCT CGAGGCCGAC
CATGTCTCGC CCGATGGGCA GGCCCGCCCC AACTACCACA CCTCCTTCGA GGCCCTGCAG
GAGGCCGTGG GTTCCTTCGC TGGTCGGGCC AAGCACGTCA TCTACAACGG CGAGCCCCGC
TGGCAGTTGC TGGACGCGCT CACCCAGGGC CGCCCCCGCA GCAGCTTCGG GCTTTTGACA
GGCGACTGCC ACGCTAAAGA AATTGCCCTC GAGCCCTTCG GCAGCCGCTT CGAGCTGGTC
TGGCAGGGCC GGTCGCTGGG CCCGGTGCAC CTGCAAGTCC CCGGTGAGCA CAACATCACC
AACGCCCTGG CCGCCTCCGC CGCAGCCCTG GTGGCCGGGA TCCCCTTCGA GGCCATCCAG
CAGGGCCTCT ACCAGTACAC CGGGGCCAGC CGTCGTTTTG AGAAGATTGG CGAACTCAAC
GGGGCCCTGA TCGTGGACGA CTACGCCCAC AACGCCACCA AACTGTTCGC CCTGCTCAAA
GCCGCCCGCA ACACCGGCCT GCGGGTGCGG GCCGTCTTCC AACCCCACCG CTATGGCCGC
AGTGAGCAGG AATGGCCCCT GTACGCCCAG GCCCTCGAGC AAGCCGACGA GACCCTGCTC
CTCGATGTCT ACGCCGCCGG GGAAGCCCCC CTCCAGCTCA CCAGCGCCCA GATTGCCCAG
CGCATACTCG AGCACCTCCG CGCCAAGGGC CGCTGGGCTT CCTATCAGAG CTGGGAAAGC
GCCCTCGACT ACCTGCGCCA GAGCGCCGCA CCGGGTGAGC TGATTCTGAC CATCGGGGCC
GGCAACGTCT TCAGGCTGGG GCGGCTGCTG GTGACCGAAA AGGAGGCCGT GTGA
 
Protein sequence
MKHYHLMGIG GISMSGLARI LRKDGHLVSG CDSQPSDLTR QLEREGIRVY QGHSPEHLHA 
VDVLVASTAI KDSEPELVTA HTLGIPVWRR IQVVAEILRG GFSLGVTGSH GKTTTTSMLA
SIFIAAQTDP TVLLGAELGL IGGSAKVGSG RYRIAEVDES DPLFRFLELD VAVLTNLEAD
HVSPDGQARP NYHTSFEALQ EAVGSFAGRA KHVIYNGEPR WQLLDALTQG RPRSSFGLLT
GDCHAKEIAL EPFGSRFELV WQGRSLGPVH LQVPGEHNIT NALAASAAAL VAGIPFEAIQ
QGLYQYTGAS RRFEKIGELN GALIVDDYAH NATKLFALLK AARNTGLRVR AVFQPHRYGR
SEQEWPLYAQ ALEQADETLL LDVYAAGEAP LQLTSAQIAQ RILEHLRAKG RWASYQSWES
ALDYLRQSAA PGELILTIGA GNVFRLGRLL VTEKEAV