Gene Mrub_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1952 
Symbol 
ID8880061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2008449 
End bp2010542 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003507728 
Protein GI291296330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00187694 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCGTC TGACCTGGTT TTTCGGGCTG CGAAACAACT TCGTCACCCA GTCGCGGGCC 
ATGTCGGCGG GCCTGGGCCG CATCCGCACC CAGCTGCAGG GCTCCGGGCG GGACAGTGCG
GCTGCAGCTC GGGCCATCGC CGGCAGCTTC GGGGTATCGA CCGCTGCCGC GCGCCGCCTG
GTGGGGGCCC TGGTGGCGGT AGGGGCGGCC AGCCGCCACC TGGCCAGCAT CCGCGCCTAC
GCCCAGAATG CCTATTCATC GCTAAGCGGG CTGATTGGCC GCCTGACCAG CCTGCCCAAC
CTCCTACTGG CTGGGGCGGC TGGGCTGACC ACCAAGGCCA TATTCGATGC CCTGGGCTTC
AAGGAGCAGC AACTCATCAG CCTCCGGGTG ATGCTGCGGC CCCAGTTCGG TGCGGACGCC
GGGCGCATGG CCCAGGAAAC CTATGCCATG CTGGCCCGGT TTGCCGCCCA GACGCCCTTC
GAGACCCAGG AAGTCCTGGC CGGCGGCAAG CAACTGCTGG CCGCCGGGGT GAATGTCAAG
AACCTGCAGG GGCTGCTCAA GGACGCCGGC GACCTGGCCT CGGCGATGGG GGTGCGGCTG
GAGGACGCCA TCAGCCCCCT GACCCGCCTG CGCTCAGGGA ACTTCGGCGA GGCCTTTGAG
CGGCTGCGGG AGCTGGGCAT TAGCCGGGAG CTGCTGGAGG CCCAGGGCCT CAAGTTTGAT
AAGGGCGGGA GCTACGTCGG CTCAGTGAAC AAGGCCATGC TGGCGGTGCG CCAGATCATC
CAGAAGCGAT TTGGCGGGCT GATGGAGGAG CAGAGCACCA GCATCTTTGG CCTGATGTCT
ACCCTCAAAA GCCGCCCCTT CGAACTCTTC AGCCAGATGG ACGTGGGCGA TGGCGGCCCG
CTAAAGCCCT TCAAGCAGAT GCTCAGCAAC CTGGCCGCCC TGACCGACTT CAGCCAGGGC
CCCGGGGCCG CCATCTCCAG GCGCTTCCAG GACAGCCTGG GCAGGCTGAT GCAAGCAACG
TTCGGGCCGC TGGCCAGCGC TACCGAACCG AAAAAGGCCG GGGAGGCCAT CCTGGGCTTC
CTTGATCGGA CCGCCCTGCT GGCGCAGAAG GCCCGGCAGT ATTTCCCCCT GGCCCTGGGG
TATGCCCGGC AGTTCTGGGC GGGGGTGCAG ACCGGACTGG GTGCGCTGCA GGGGGTGTGG
AAGGCGCTGG AGCCGGGCAT TGCGCTGCTG GGCCATCTGG CCAGGGGGTT CTCGGCCAAT
CAGGCCGGCC TGGCCGGAAC CAACGCCGGG GGCCTGGCCC TGATGGGCAC CCTCCTGGTG
CTCACCACCG GGCTCCGCCT GCTCAACACC CTGACCTTCG GCCTGGCCGG CACCCTGCTG
CGCCTGGGCC TGGTCTGGGT AGCCACCGCA GCCCGGATGG CAGGCGGTTG GCTGCTGGCG
ATGGGGCCGG TGGGCTGGGT CATTGCCCTG GTGGGGGGCC TGGTGGCTGC GGTGGTGCTG
GCCTACAAGC GCCTGGGCTG GTTCCGCGAC GGGGTAAACG GGGTGTGGCA GGCCATCATC
ACCAAAGGCG GGGAGCTGAT TGCCTGGATC AGCACCTTGC CCGAGACCAT CCGCAGCGCC
CTGGCCAACC TGCCGGGGCT GATGCTGGAG ATTGGCCGCA ACGCCATTAC CGGCCTGTGG
AACGGCCTCA AGGCCGCGCC CGGCAAAATC TGGGAGGCAG CCAAGGGGCT GGCTGTGCAG
GCAGTAGGCG GGGCGCGGGC GGGCCTCGAG GTGCGCTCCC CCAGTCGGGC CCTGGCCCGT
ATCGGCGAGC AGAGCGGCCT GGGCCTCGAG CGGGGCCTGC TGGCCATGCG CGGGGTGGTA
GCCGGCGCGG GGCTGGCCCT GGCCACGGCG GCCATTCCGG CCGCCCCCCA GATGCCGGCG
GCCGTTATCG CCGCGGGTGC AGGGGCTTCG GCTGCCACCG TTACCCGCGA GGTGCACGTT
CATATCGGCA ATATCGTGCT GCAGCAGGCC CAGACCCCCA GCGAGGCCAG AACCCTGGTG
GTGGAGGCCA TCCTGGAGGC CCTCGAGCGG GCCGCCATTG AGGAGGGCGC CTGA
 
Protein sequence
MRRLTWFFGL RNNFVTQSRA MSAGLGRIRT QLQGSGRDSA AAARAIAGSF GVSTAAARRL 
VGALVAVGAA SRHLASIRAY AQNAYSSLSG LIGRLTSLPN LLLAGAAGLT TKAIFDALGF
KEQQLISLRV MLRPQFGADA GRMAQETYAM LARFAAQTPF ETQEVLAGGK QLLAAGVNVK
NLQGLLKDAG DLASAMGVRL EDAISPLTRL RSGNFGEAFE RLRELGISRE LLEAQGLKFD
KGGSYVGSVN KAMLAVRQII QKRFGGLMEE QSTSIFGLMS TLKSRPFELF SQMDVGDGGP
LKPFKQMLSN LAALTDFSQG PGAAISRRFQ DSLGRLMQAT FGPLASATEP KKAGEAILGF
LDRTALLAQK ARQYFPLALG YARQFWAGVQ TGLGALQGVW KALEPGIALL GHLARGFSAN
QAGLAGTNAG GLALMGTLLV LTTGLRLLNT LTFGLAGTLL RLGLVWVATA ARMAGGWLLA
MGPVGWVIAL VGGLVAAVVL AYKRLGWFRD GVNGVWQAII TKGGELIAWI STLPETIRSA
LANLPGLMLE IGRNAITGLW NGLKAAPGKI WEAAKGLAVQ AVGGARAGLE VRSPSRALAR
IGEQSGLGLE RGLLAMRGVV AGAGLALATA AIPAAPQMPA AVIAAGAGAS AATVTREVHV
HIGNIVLQQA QTPSEARTLV VEAILEALER AAIEEGA