| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1930 |
|---|
| Symbol | |
|---|
| ID | 8880038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1986628 |
|---|
| End bp | 1987770 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003507707 |
|---|
| Protein GI | 291296309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00576419 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000000435694 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCGA CACTTTTTCG CAGCCGGCGC GAGCGAAAGC TAGGTGAGCA CATTGCGGTA
CGCCTCGAGG GGGTCACCAA GCGCTTTGGC GACCAGAAGG CGGTTGAAAA GGTCAACCTC
GAGGTTCGCG ACGGCGAGTT TTTTAGCCTG CTGGGGCCCT CGGGCTGCGG CAAGACCACG
CTGCTGCGCA TGATTGCAGG GTTTGAGACC CCGGACGAAG GCCGGGTCAT CATCGGGGGC
AAGGACATGA CCCAGGTGCC GCCCTACCTG CGCCCGGTCA ACACGGTTTT CCAGAACTAC
GCCCTCTTCC CACACATGAC CGTGGAGCAG AACATCGCTT TTGGGCTCAG AATGAAAAAA
ATGCCCCGCG ATGAGATCGC CCGGCGGGTG CAGTGGGCGC TCGAGCTTAT CAACCTGCCA
GGCTACGAGA AGCGCCGCCC GGATCAGATG TCCGGGGGGC AGCGGCAGCG GATCGCCCTG
GCCCGGGCCC TGGTCAACGA ACCGGAGGTG TTGCTGCTCG ACGAGCCGCT CTCGGCCCTC
GACCTCAAGC TGCGTCAGGA GCTGCGGGTA GACCTGATGA ACCTGCAGGA GCGGCTGGGC
ATCACCTTCA TTTTCGTGAC CCACGACCAG GAAGAAGCCC TGGTGATGTC GGATCGCATC
GCCGTCATGA ACAAAGGCCG CATCGAGCAG TTGGGCCCCA CCGAGGAGAT TTACGAGCTG
CCGCGAACCG CTTTTGTAGC CAGATTCATC GGCGACTCCA ACCTGATTCC GGCCCAGGCC
ATCGAGCCGC GCAAGGTTAA AACGGCGCTG GGTGAGTTCG TGCTCGACGA CGAGGATGCC
CTGACCCCTG GCCAGGAGGT GTTGCTCTCG ATTCGCCCCG AAAAGATCCG CCTTTTCCGT
GAGAGGCCGA GCCTGCCCAA CGTATTCCGA GCCAAAGTGG ACGACATCAT CTACACCGGC
TCGGAGAACC AGTATGTGCT GGTGGCGGGT GGTCAGCGCT TGATGTGCGA GACCCTCAAC
CAGGACATCC AGGAGCCCGG CCACGAGGAG TTTGCCTACG ACGAAGAGGT CTGGGTGGCC
CTTACCCCGG AAAAACTGGT GGTTATTCAG GGGGGGAGTG AAGGGAGCGA TCCCTATGCG
TGA
|
|---|
| Protein sequence | MEPTLFRSRR ERKLGEHIAV RLEGVTKRFG DQKAVEKVNL EVRDGEFFSL LGPSGCGKTT
LLRMIAGFET PDEGRVIIGG KDMTQVPPYL RPVNTVFQNY ALFPHMTVEQ NIAFGLRMKK
MPRDEIARRV QWALELINLP GYEKRRPDQM SGGQRQRIAL ARALVNEPEV LLLDEPLSAL
DLKLRQELRV DLMNLQERLG ITFIFVTHDQ EEALVMSDRI AVMNKGRIEQ LGPTEEIYEL
PRTAFVARFI GDSNLIPAQA IEPRKVKTAL GEFVLDDEDA LTPGQEVLLS IRPEKIRLFR
ERPSLPNVFR AKVDDIIYTG SENQYVLVAG GQRLMCETLN QDIQEPGHEE FAYDEEVWVA
LTPEKLVVIQ GGSEGSDPYA
|
|---|
| |