Gene Mrub_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1927 
Symbol 
ID8880035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1983951 
End bp1984976 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003507704 
Protein GI291296306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.96322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000194914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAGAG TGTGGGTAAT TGCTTTGCTG GGATTGTTGA TCGCCGGTTG TGGGCAGCAG 
AAGCAAGAGC TGCGCCTGTT GAACTGGTCG GATTACATGC CCAAGGAGGT GCTTGAAGAG
TTCGAAAAGC GTGAGGGCAT CAAGGTGGTG GAGGACACCT ACGACTCCCC CGAGGCCATG
CTTTCCAAGC TGCAAGCAGG GGGCGATGCC GAGTACGATG TGCTGATTAC CGCCGACTAC
ACGGTGGGAT CGCTGGCTCG AGCCGGTAGC CTACAGGAAC TCGACAAGAG CAAAATTCCC
AACCTGCAGA ACCTCGACCC CCAATTCGCC AATCCAGCCT TCGATCCGGG GGCCCGGTAC
AGCGTGGTGT ACCAGTGGGG CACCACCGGG CTGGCCTACC GCGAAGATCT GGTGAGCGGG
CCGGTGGAAA GCTGGGCGGT TATCTTTGAT CCGGCCAAGC AAGTGGGGTC TTTCCTACTG
CTGGACGAGA TGCGCGAGAT GATGGGGGCG GCTCTCAAAT ACCAGGGGGA GTCGGTTAAC
ACCACCGACC CGGAGAAGCT CGCCAAGGTG CAGGAGCTTC TGCTCGAGGC CAAGCGGCGC
TCGCAGGGCT TTGCCGGTGG AACCAGCATC CGCGACCGCC TGATTGCGGG TGACATTGCC
GTGGGGCCTG CCTACTCGGG GGATATTCTG GCGGCCCAGG CCGAGAACCC CCAGCTCAAA
TATGTGATTC CCGTTGAAGG GGCCACCCTC TGGACGGACA ACCTGGTGGT GCTCAAGAAG
AGCCCCAACC ACGAGCTGGC CTATAAGTTC ATCAACTTCC TGCTGGAACC CGAGATCGCC
GCGCAGATCT CCAACTCGAT TGGCTATGCC ACACCGGTGG CAGCGGCGAT GGATCAGATT
GAAGAAAAGG ACAACCCCAT CATCTACCCC AGCGAGGAGA TAAGGGCCCG CCTCGAGCTG
CTCGCCGACC TGGGCGATCA GGCCGATGCC TTCAACAAGG TGTGGGCCGA GGTGAAATCC
CGTTAG
 
Protein sequence
MNRVWVIALL GLLIAGCGQQ KQELRLLNWS DYMPKEVLEE FEKREGIKVV EDTYDSPEAM 
LSKLQAGGDA EYDVLITADY TVGSLARAGS LQELDKSKIP NLQNLDPQFA NPAFDPGARY
SVVYQWGTTG LAYREDLVSG PVESWAVIFD PAKQVGSFLL LDEMREMMGA ALKYQGESVN
TTDPEKLAKV QELLLEAKRR SQGFAGGTSI RDRLIAGDIA VGPAYSGDIL AAQAENPQLK
YVIPVEGATL WTDNLVVLKK SPNHELAYKF INFLLEPEIA AQISNSIGYA TPVAAAMDQI
EEKDNPIIYP SEEIRARLEL LADLGDQADA FNKVWAEVKS R