Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1921 |
Symbol | |
ID | 8880029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1979756 |
End bp | 1980763 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter-like protein |
Protein accession | YP_003507698 |
Protein GI | 291296300 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.172983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000015189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGAGATCG CGTATGCCCT CGAGCACCCG GTAAAGCTCG AGCTCAGCCT GCAGGTGCGG GGCTTTACGG TACTGCTGGG CGAGAGCGGG GTGGGGAAGA CCAGCCTGCT CAAGGCCATC GCCGGCCTGA TTCCGGCCAG GGGCCAGCCC TTTGCCGGGC TGCGGGCCGA GGCGCGAAGG GTGGGCTACC TGCCCCAGCA TCTGGCCCTG TTTCCCCACC TGCGGGCCTG GCAGAACGTG GCCTTTCCGC TGGCCCACCT GCCCCCTCCG GCCCGCAAAA AGAAGGCCCT GGCCTACCTC GAGCTGATGG GCATGGCCGA ACTGGCCGAG CGCTTCCCCC GCCAGATGTC CGGTGGGCAG CAGCAGCGGG TGGCCCTGGC CCGGGCCCTG GCCCGCGAGC CCCAGATTCT ATTGCTGGAT GAGCCCACCA GTGCCCTGGA TGCGGCGACC CGGGAGGAGG TTTTTGCAGG GGTGCTGGAG CGCCTTAGAT CGCTGCAGAT ACCCACCCTG GCGGCCTCGC ACGACCACTG GCTGGCCCAG CGGGCCGACT GGGTGGCCGT GTTGACCAAA GCAGGGCTGG CCCAGCAGGG AACCTCCGAA GAGATATTTG CCCGTCCTGC GAGCCTCGAG GTGGCCCGGC TGGTGGGCTT TCGTAACCTT CTGGAGGGCA CGGTTCTGGC TGTGGATGGC GCATGGGTGC AGGTGCAAAC CCCCCTGGGC ATCCTCAAAG CCCCCTGCCG AAACGGCATT TCAGTTGGGC AGCGGGTGAT GCTGGGGGTT CGCCCGGAGG AAGTTTTTAC CCAGGACGGC CCTGAAAACC GCATCCGAGG CCAGGTACGG AACCTGCGCG CGCAGGGTTT GCGGGTGCGG GGCGAGCTGA TGGTGGGCGC GGTGGGCCTG GACTTCTTCC TGCCGCGCTA CAAACAGGCC CAGCTCGAGC TTGCCGAAGG CCAGTGGCTC GAGGTGGCCC TCGAGCCCCG CTTTTTGCAC CTGATACCTC TTGCCTAA
|
Protein sequence | MEIAYALEHP VKLELSLQVR GFTVLLGESG VGKTSLLKAI AGLIPARGQP FAGLRAEARR VGYLPQHLAL FPHLRAWQNV AFPLAHLPPP ARKKKALAYL ELMGMAELAE RFPRQMSGGQ QQRVALARAL AREPQILLLD EPTSALDAAT REEVFAGVLE RLRSLQIPTL AASHDHWLAQ RADWVAVLTK AGLAQQGTSE EIFARPASLE VARLVGFRNL LEGTVLAVDG AWVQVQTPLG ILKAPCRNGI SVGQRVMLGV RPEEVFTQDG PENRIRGQVR NLRAQGLRVR GELMVGAVGL DFFLPRYKQA QLELAEGQWL EVALEPRFLH LIPLA
|
| |