Gene Mrub_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1886 
Symbol 
ID8879994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1945074 
End bp1945718 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003507663 
Protein GI291296265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.259351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.142425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAC CCCCCGACCA ATTGCTGGTG TTTGCCCTGG CCAGCCTGGC CCTGCTTCTG 
ATTCCAGGCC CGGCGGTGCT TTACATCGTT ACCCGCAGCG CTTCGCAAGG GCGCGCGGCG
GGTGTGGCCA GCGTGCTGGG TATCCAGTGC GGGGGCCTGG TGCATGTGCT GATGGCTAGC
CTGGGTCTTT CGGCCATCCT GCTCTCGAGC GCCCTGGCTT TCAACCTGGT TAAGTATGCA
GGAGCGGCCT ATCTGGTCTA CCTGGGCCTG CGAACCTGGC TGGCTAGAGA GCCCCTCGAG
CTTGCGGTAG CAGCACGCCA GCCTCTAGGG CAAATTTTCC TGCAAGGGTT GGTGGTCAAC
GCCCTGAACC CCAAAACCGC ACTGTTCTTT TTTGCCTTCC TGCCCCAGTT TGTCGACCCG
GCGCGGGGGG CGGCCTGGCT GCAATTTTTG CTGCTCGGCC TGGTTTTCAT AGCCCTGGCT
ACCTTTAGCG ATGGTACGTA TGCCTTTCTG TCGAGTTCGT TAGGGGCATG GCTGCGTCAA
AAAACCAGGG AAGTGCGCTT TGCCCAGGGC CAGCGTTGGA TCACTGGGGG CATCTACATT
GGGCTGGGCC TGACCGCAGC CCTGACCGGC AGCCGGCATA AATAG
 
Protein sequence
MLIPPDQLLV FALASLALLL IPGPAVLYIV TRSASQGRAA GVASVLGIQC GGLVHVLMAS 
LGLSAILLSS ALAFNLVKYA GAAYLVYLGL RTWLAREPLE LAVAARQPLG QIFLQGLVVN
ALNPKTALFF FAFLPQFVDP ARGAAWLQFL LLGLVFIALA TFSDGTYAFL SSSLGAWLRQ
KTREVRFAQG QRWITGGIYI GLGLTAALTG SRHK