| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1885 |
|---|
| Symbol | |
|---|
| ID | 8879993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1944241 |
|---|
| End bp | 1945065 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like protein |
|---|
| Protein accession | YP_003507662 |
|---|
| Protein GI | 291296264 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.152883 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAG CCAATACCTC TCCAGAGTCA TCCGCCAAAG GTTCTAAGGC AGAGGCCATC
GTGTCGGTGC AGGGTGTCTC GATGGTGTTT CCAAACGGAA CCGTGGCCCT GAAGGATGCC
AACCTCGAGA TCGCCCAGGG GGAGTTCATC AGCCTGATTG GGCCCTCGGG TTGCGGTAAA
ACCACCCTGC TGCGCCTGCT GGCCGACCTG ATCCAGCCCT CTTCGGGCAC CATCCGCATC
GGGGGTAAAA GCCCCGAGCA GGCCCGCAAG GCCCGGGCCT ACGGCTATGT GTTCCAGGCC
CCCACCCTGA TGGAGTGGCG CAATGTGCTC TCGAACGTAA TGCTGCCCTT GGAGGTGATG
AACTTTCCCG TGCAGGAGCG CAGGGCCAGG GCCGAGCGGA TGCTGGCTTT GGTGGGGCTG
GAGAAGTTCG CCAGGCACTA CCCCTGGCAG CTTTCGGGCG GGATGCAGCA GCGGGTCTCC
ATCGCCCGGG CCCTGGCTTT CGACCCGCAG CTTTTGTTCA TGGATGAGCC CTTTGGCGCC
CTGGACGAGA TTACCCGCGA GAACCTGAAC CTGGAGCTTT TGCGCCTGTG GCGCGAGACC
GGTAAGACCA TCATCTTTGT GACCCACTCC ATCCCCGAGG CGGTCTTCCT CTCCACCCGG
ATCGTGGTGA TGACCCCGCG CCCCGGCAAG ATCGAGACGG TCATACCGGT AGACCTGCCC
CAGCCCCGCA CCTTCGAGAC CCGCGAGACC ACGCGCTTTT TCGAGCTGGC CACCCTGGTG
CGTGAGGCTT TGCGCAAAGG CCACAGCTAC GAGGTGACCG AGTGA
|
|---|
| Protein sequence | MMQANTSPES SAKGSKAEAI VSVQGVSMVF PNGTVALKDA NLEIAQGEFI SLIGPSGCGK
TTLLRLLADL IQPSSGTIRI GGKSPEQARK ARAYGYVFQA PTLMEWRNVL SNVMLPLEVM
NFPVQERRAR AERMLALVGL EKFARHYPWQ LSGGMQQRVS IARALAFDPQ LLFMDEPFGA
LDEITRENLN LELLRLWRET GKTIIFVTHS IPEAVFLSTR IVVMTPRPGK IETVIPVDLP
QPRTFETRET TRFFELATLV REALRKGHSY EVTE
|
|---|
| |