Gene Mrub_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1790 
Symbol 
ID8879898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1841974 
End bp1843161 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative sodium ABC transporter permease protein 
Protein accessionYP_003507570 
Protein GI291296172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TCCTGATCAT CGCCCGAAAA GAGCTGCTTA GCGTGGTGCG CGAGCGCCGG 
GTGCTCTTTA CCACCCTGGT GCTGCCCATC CTGATCATGC CGCTATTGAT GTTCGGGCCC
ATCCTGCTCT TCGGCAACGC CGCCCGCCAG ACCCAGGAGT CGGTGCAGAA GGTGGGGGTG
GTGGGGGTTC CGACGGTGGT ACTGGAGGAA CTCCGCAAAG CCAGGGTCGA GCCCATCGAG
GTAGCCAACC CCCAGGAGGC CGTGCAGAAC CGCGAGGTGC AGGCGGCCCT GGTCTTCGAG
AATGGGCGCT ACATTATCTA TGGCCGGCTC TCGAGCGGGG CCACCCAGAG TGCGCTGGTG
GTGGAGAAGG TGCAGGCTGC GCTGCGCGCT TACAAAGACC AGGTGGTGGC CGAGCAACTG
CGAGCCCGGG GGATTGGAAC CGATATTCTG GAGCCCTTCA GCGTCGAGAC CCAGGACGCC
TCGCGCGAGC AGGAGCGGGC CGCCGGCCTC TTTGCCTTCC TGATCCCTTT CTTTTTGGTT
TCGTTCATTC AGGCGGGCGG TATGCCGGTT GCGGTAGACG CCACGGCAGG GGAGAAAGAA
AAGGGGACGC TCGAGGCCCT TCTGGCCGCC CCCGTCCCGC TCATCCAGGT TCTGCTGGGC
AAAGGGCTGG CGGTGTTTGT GATGTCGCTG CTCTCGACCT TTGCGGCCGT GGCCGGGCTC
TTGCTGGGCG GCGGGGTGTT CCGCAACCTT TTTGCCGCCC AGCTTCAAGC CGTGCAGAAC
GGAGAGAATC AGGCCCAGTT AGGGGGTGCC CTGGCCCTCG ACCCGCTGGG CTACCTGGCC
ATCTTGGTAA CGGCAGTATT GTTTGCCCTG CTCATCATTG CCATCATGAT TTCCCTGGGC
CTTTACGCCC GCAGTTTCAA GGAGGCCCAG AGTTATTTGA GCCCCTTATC GCTGGTGATG
CTTATCCCTT TGCTCTTCCT GCAGTTCTCC GATTTTCTAA AGCTGCAAGA CTGGTATTTC
GCCCTGCCCC TTGTAAACGT AATGCTGGCG CTGGACGCGA TTGTCAAAGG TGCGGCCACT
GCCACCCAAC TACTTATTAC CTGGGCCTCT ACCCTGGCCT ATGGCGCGCT GGCCCTGCAC
CTGGCCTATC GCAATTTCCA GCGGGAAGAC GTGGTTTTCA GAAACTAG
 
Protein sequence
MNEILIIARK ELLSVVRERR VLFTTLVLPI LIMPLLMFGP ILLFGNAARQ TQESVQKVGV 
VGVPTVVLEE LRKARVEPIE VANPQEAVQN REVQAALVFE NGRYIIYGRL SSGATQSALV
VEKVQAALRA YKDQVVAEQL RARGIGTDIL EPFSVETQDA SREQERAAGL FAFLIPFFLV
SFIQAGGMPV AVDATAGEKE KGTLEALLAA PVPLIQVLLG KGLAVFVMSL LSTFAAVAGL
LLGGGVFRNL FAAQLQAVQN GENQAQLGGA LALDPLGYLA ILVTAVLFAL LIIAIMISLG
LYARSFKEAQ SYLSPLSLVM LIPLLFLQFS DFLKLQDWYF ALPLVNVMLA LDAIVKGAAT
ATQLLITWAS TLAYGALALH LAYRNFQRED VVFRN