Gene Mrub_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1785 
Symbol 
ID8879893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1837588 
End bp1838715 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_003507565 
Protein GI291296167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.316159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA ATCCCAAACG CGTTGTGGTG CTGGGCTCAA CCGGTTCTAT TGGCACCCAG 
ACCCTGGATG TCTGCCGCTG GCGGGGCTAC CGGGTGGTGG GGTTGGTGGC CGGTAAGAAC
CTGGAGCTTT TGACCCAGCA GATTGCTGAG TTTCGACCCG AGGTAGTGGC CGCCGACCCT
TCCATCCTCC CCGAACTCGA GTCCCGCTTT CCCGGTTTGC GCACCGCCGA CGCCCTCGAG
GTGGCCGCCT GGCCGGCCGA GGTGGTGGTG GGAGCCATAC CGGGCCTGGC GGGCCTGCCG
GGGGTGCGGG CAGCCGTACA GCAAGGCCGC CGCCTGGCCC TCGCCAACAA AGAGAGCATG
GTGGCCGCCG GGCCGCTGCT GTGGCAGGAG GCCGAGCAGA GCGGGGCCGA AATTATCCCG
GTGGACTCAG AGCACTCGGC CCTGTTCCAG AGTCTTTTGG GCGAGCCGTT GGACGACGTA
GCCGAGCTGA TTCTCACAGC TTCTGGCGGG CCTTTTTTGC GGGAACCGGC CGACCTTTCC
AGCGTTACCC CCCAGATGGC CCTCCAGCAC CCCCGCTGGA AGATGGGGCC CAAGGTGACC
ATTGACTCTT CGACGCTTTT CAACAAGGGC CTCGAGGTGC TGGAAGCCGT GCAGTTGTTC
AAAGTGCCCA TCGAGAAGGT CAAGGTGCAG ATTCACCCCC AATCGTATGT GCACTCCATG
GTGCGCTTCC AGGACGGCAA CCTCAAGGCC CAGCTCGGCC CCACCGATAT GCGGCTGGCT
ATCCAGTACG CCCTCACCCA CCCCCAGAGG CCCCCTTCCC CGCTGCGCGA GGCCCCCATC
CCCGAGCGGC TGGAGTTTTA CCCACCGGAT ACCAGGCGCT TCCCAGCCCT GGCCCTGGCC
TATGAGGCCG GACGGATGGG GGGGCTGGCC CCGGTGGTGC TCAACGCTGC CGACGAAATC
GCGGTGGAGG CCTTTTTACA AGGGCAGATT GGTTACCTGG AAATCCCAAG GGTGCTGGAA
AAAGTGTTAC AGCAGACTCC TGCAGGCGCA CTAACCTGGG ACAATATCGC TTATGCCGAC
CTCGAGGCCC GCCGGTGGGC CCGTGAGTAC CTGAAGGTAA AGGTCTGA
 
Protein sequence
MNDNPKRVVV LGSTGSIGTQ TLDVCRWRGY RVVGLVAGKN LELLTQQIAE FRPEVVAADP 
SILPELESRF PGLRTADALE VAAWPAEVVV GAIPGLAGLP GVRAAVQQGR RLALANKESM
VAAGPLLWQE AEQSGAEIIP VDSEHSALFQ SLLGEPLDDV AELILTASGG PFLREPADLS
SVTPQMALQH PRWKMGPKVT IDSSTLFNKG LEVLEAVQLF KVPIEKVKVQ IHPQSYVHSM
VRFQDGNLKA QLGPTDMRLA IQYALTHPQR PPSPLREAPI PERLEFYPPD TRRFPALALA
YEAGRMGGLA PVVLNAADEI AVEAFLQGQI GYLEIPRVLE KVLQQTPAGA LTWDNIAYAD
LEARRWAREY LKVKV