| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1768 |
|---|
| Symbol | |
|---|
| ID | 8879875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1824890 |
|---|
| End bp | 1825849 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003507548 |
|---|
| Protein GI | 291296150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.792015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAG TTTTGGTGAC CGGTGCGCTG GGTCAGGTGG GTTCCGAACT GATTCCGGCT
TTGCGTGGTT TGTACGGAAG CGAAGAAGTC TTGGCGACCG ATATTCGGCG GGCGCCCCCA
GGGCATCCTG CGCTGGAGGG GCCTTATGAA CAGCTAGACT GCACCAACGG GCCGGCCTTG
CTGGAGTTTT TCGTTCGTCA TCGTGTGGGT GTGGTCTATC ACCTAGCGGC CATCCTTTCG
GCACGGGCTG AGGCCGAGCC CCAGTTGGCC TGGCAGGTCA ACATCGAGGG CCTACACAAC
GTGCTGGAGG CGGCGCGGCA GGTTGGGGCT CAGGTATTTG TCCCCAGCTC CATCGCGGCT
TTTGGCCCCA GCACACCGCG CGACCCCACC CCCCAGGACA CCCTTCAACG TCCCAACACC
CTTTACGGCG TGACCAAGGT GGCTGGTGAG CTGCTGTGCG ACTACTATGC CCATCGCTTT
GGCCTGGATG TGCGGGGCTT GCGGTACCCT GGCTTGATCT CGTACACCGC ACCGCCGGGT
GGGGGTACCA CCGACTATGC GGTGGAGATT TTTCACCACG CCCTGCGGTA CGACCGGTAC
ACCTGCTTTT TGGCACCGGA TACCCGGCTG CCCATGATGT ACATGCCGGA TGCCATCCGG
GCCACCCTCG AGCTCATGCA GGCCGATCCG GCCCGGCTGC GGCATCGCAA CGCCTTTAAC
CTAACGGCCT TTAGCTGCAC CCCCGCCGAG CTGGCGGCCG AAATTCAGAA GCACCGGCCC
GGCTTCAAGA TGCACTACGA AGTCGACCCA CTGCGGCAGG CCATTGCAGA CTCCTGGCCG
CGCACGCTGG ATGATAGCGC GGCCAGGGAG GAATGGGGCT GGCGGCCCCA GTACGACCTG
GCGGCCATGA CCAAAGACAT GCTAGAAAAA CTGGCCGAAC GCGCCTTGAA GGAGGCTTAG
|
|---|
| Protein sequence | MTRVLVTGAL GQVGSELIPA LRGLYGSEEV LATDIRRAPP GHPALEGPYE QLDCTNGPAL
LEFFVRHRVG VVYHLAAILS ARAEAEPQLA WQVNIEGLHN VLEAARQVGA QVFVPSSIAA
FGPSTPRDPT PQDTLQRPNT LYGVTKVAGE LLCDYYAHRF GLDVRGLRYP GLISYTAPPG
GGTTDYAVEI FHHALRYDRY TCFLAPDTRL PMMYMPDAIR ATLELMQADP ARLRHRNAFN
LTAFSCTPAE LAAEIQKHRP GFKMHYEVDP LRQAIADSWP RTLDDSAARE EWGWRPQYDL
AAMTKDMLEK LAERALKEA
|
|---|
| |