Gene Mrub_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1678 
Symbol 
ID8879784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1714068 
End bp1714784 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC transporter-like protein 
Protein accessionYP_003507459 
Protein GI291296061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.939026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0800845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGCG TTCAGGGCCT TTGCAAACGC TTTGGTGGGG TGACAGCGGC CAATGAGGTT 
AGCCTTCAGG TAGCACCCGG TGAAATTCTG GCGGTGATCG GCCCCAACGG CGCCGGTAAG
AGCACCCTGC TGAACCTGCT TTCGGGCCTG CTCCGCCCCG ACGAGGGTCG GATCGAGTTT
TTAGGCCAGG AGATCACCCA TGCTCCACCG GAAGTGCGCA CCTGGAAGGG CCTGGGACGG
GCCTTTCAGA TTGTGCAGCC CTTCCCGGAG ATGAGCGTGT GGGAAAACCT TCTGGTCGGG
GCTCTGTACG GTAAACCCAG CACCCCGCGC AAAGTGGCTG AACGGGTGGT GGCGGAGGTC
ATCGAGCTCA CCGGCCTGGC TCCTAAAGCC CAGACCCCCG CCGGGGAGCT CACGCTTCTG
GAGGACAAGC GCCTCGAGCT CGCCCGGGCC CTTTGCACCC AGCCCAGGCT GTTGCTCCTG
GACGAGGTGA TGGCCGGGCT GCGCCCTTCG GAGGCCCTGG AGGCGGTGGC ACTGGTGCGG
CGAATCCGGG ACAGCGGCGT AACGGTGCTG TTCATCGAGC ACCTGATGCC GGTGGTGCGG
GCCCTGGCCG ACCGGGTGGT GGTAATGGAC TATGGCCGGG TGATCGCCGA GGGGCCCTAC
GATGCGGTGG CCGCCAACCC CAAGGTGCGC GAGGCTTATC TGGGGAGGGC CCAATGA
 
Protein sequence
MLSVQGLCKR FGGVTAANEV SLQVAPGEIL AVIGPNGAGK STLLNLLSGL LRPDEGRIEF 
LGQEITHAPP EVRTWKGLGR AFQIVQPFPE MSVWENLLVG ALYGKPSTPR KVAERVVAEV
IELTGLAPKA QTPAGELTLL EDKRLELARA LCTQPRLLLL DEVMAGLRPS EALEAVALVR
RIRDSGVTVL FIEHLMPVVR ALADRVVVMD YGRVIAEGPY DAVAANPKVR EAYLGRAQ