Gene Mrub_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1670 
Symbol 
ID8879776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1705261 
End bp1707261 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content63% 
IMG OID 
ProductDNA ligase NAD-dependent 
Protein accessionYP_003507451 
Protein GI291296053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.229082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC CTAAGCAGCG CATCATGGAA CTGCGGGAGC TGATTCGCTA CCACAATTAC 
CGCTATTACG TGCTGGACAA ACCGGAAATT TCCGATGCCG AGTACGACCG CCTGCTCCAG
GAGCTGAGGG CCCTTGAAGA AGCCCATCCT GAGCTGATCA TCCCCGACTC CCCCACGCAA
ACCGTGGGCA GCGCCATCCT CGAGACCCCC TTCACCCCCG TGCCCCACCC CACCCGTATG
TACTCGCTGG GGAACGCCTT TTCGCAAGAC GACATCGCCG ATTTCGAGGC CAGCATCAAC
CGCTTCCTGG GCCGGGAAGA GTCGCGCGAG TATGTGCTGG AGTACAAGAT TGACGGACTC
TCGGTCAACC TCATCTATGA AGAGGGGGTG TTTCGCCAGG GGCTCACCCG CGGCGACGGC
CTGACCGGCG AGGACGTAAC GCCCAACCTG CTAGCGATTC CCGACATTCC CCGGCAGCTA
CCACAGCCCC TCGACCTCGA GGTTCGGGGG GAAATTTACC TACCCATCCA GACCTTTTTG
GAGTTGAACA CGCAGCTCGA GGAGGCTGGG GAGCCTCCTT TCAAAAACCC GCGCAACGCC
GCAGCCGGCA GCCTACGGCA AAAAGACCCC CGAATCAGCG CCAGCCGGGG CTTGCGGGGC
CTGTTTTATG GGGTGGGAAG GCCGGAAAGC CTGGGGGTCG GCACCCAGCA AGAATTGCTG
GAGAAACTAG GCCAGCTTGG TTTCTCCGTG GATCCGCATT ACCAGGTGGT GCGGGGCGTG
GAGGGCATCG AGCAGGGCTA CCAGGCCATG CTGGCCGCGC GCAAAAGCCT GCCTTTTGAA
GCCGATGGCG TGACCGTCAA GCTCAACAAT CTTTCCCTGT GGAGCGAGCT GGGCTACACC
GCCAAAACCC CCCGTTTCGC CATCGCCTAC AAGTTCCCCG CCGAAGAAAA GACCACCCGG
GTGCTGCGGG TAATCTTTCA GGTGGGGCGC ACCGGCCGGG TCACCCCGGT GGCGGAGCTC
GAGCCGGTCT TTCTGGACGG CTCCACCGTG AGCCGGGTCA CCCTGCACAA CGAAAGTTAC
GTACAGGAGC TGGGCTTACG CATCGGGGAT ACCGTGCTGG TACACAAATC GGGCGGGGTG
ATCCCCGAGG TGTTGCGGGT GGTCACCGAG GCCCCCCGGG GGCATGCGCC CGTGGAGTGG
CCCACCCACT GTCCCGAGTG CGGTACAGCC CTCGAGCTTT CGGGCAAGAT TCACCTCTGC
CCCAACCCCC TATGCCCGGC CAAGGCTTTC GAGGCGATCC GGCATTTTGC CAGCCGCAGG
GCCATGGACA TCCAGGGCCT GGGCGAGAAG CTGATTGAGC AGCTTTTGGA AACCGGTCTG
GTGCGGGATG CCGCCGACCT CTACAACCTT AAGAAAGAAG ATATTGCCGC GCTCGAGCGC
AAGGCCGAGA AAAGCGCCCA GAACCTTATT GAGCAGATCG AGGCCAGCAA AAGCCGGGGC
CTCGAGCGGC TGCTCTTTGC GCTGGGCATT CCCCAGGTCG GCGAAAGCAC CGCCCGGGCC
CTGGCCAAGC GCTTTGGGCA CCTGGACAGC ATCCTGAAGG CCACGGTCGA GGAGCTGGAT
GCCGTACCGG ACATCGCCGA GACCACTGCC CAGGCCATCC ACCAGGCCCT GGCTCGCCCG
GAGATGCAGA GCTTCATCGA GCGCCTGCGG GCCGCTGGTT TGGTGTTCGA GGCCAGAGAA
AAGCAGCAAA GCCAGGCCCT CGAGGGTCTT ACCTTTGTCT TAACCGGCGA GCTCTCGCGC
CCCCGGGAAG AGGTCGCGCG GCAGCTCGAG GCCCACGGGG CCAAAATTTC CGGCTCCGTG
AGCAGAAAAA CCAGCTATGT GATCGCCGGG CCAGGGGCGG GCTCCAAGCT CAGCAAGGCC
AAAGAGCTGG GCATTCCCAT TCTGGACGAA GCAGGCCTAC GGGCGCTGCT GGAGCAGAAA
ATCGGCGCAG CCTCCATCTA G
 
Protein sequence
MQTPKQRIME LRELIRYHNY RYYVLDKPEI SDAEYDRLLQ ELRALEEAHP ELIIPDSPTQ 
TVGSAILETP FTPVPHPTRM YSLGNAFSQD DIADFEASIN RFLGREESRE YVLEYKIDGL
SVNLIYEEGV FRQGLTRGDG LTGEDVTPNL LAIPDIPRQL PQPLDLEVRG EIYLPIQTFL
ELNTQLEEAG EPPFKNPRNA AAGSLRQKDP RISASRGLRG LFYGVGRPES LGVGTQQELL
EKLGQLGFSV DPHYQVVRGV EGIEQGYQAM LAARKSLPFE ADGVTVKLNN LSLWSELGYT
AKTPRFAIAY KFPAEEKTTR VLRVIFQVGR TGRVTPVAEL EPVFLDGSTV SRVTLHNESY
VQELGLRIGD TVLVHKSGGV IPEVLRVVTE APRGHAPVEW PTHCPECGTA LELSGKIHLC
PNPLCPAKAF EAIRHFASRR AMDIQGLGEK LIEQLLETGL VRDAADLYNL KKEDIAALER
KAEKSAQNLI EQIEASKSRG LERLLFALGI PQVGESTARA LAKRFGHLDS ILKATVEELD
AVPDIAETTA QAIHQALARP EMQSFIERLR AAGLVFEARE KQQSQALEGL TFVLTGELSR
PREEVARQLE AHGAKISGSV SRKTSYVIAG PGAGSKLSKA KELGIPILDE AGLRALLEQK
IGAASI