Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1670 |
Symbol | |
ID | 8879776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1705261 |
End bp | 1707261 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | DNA ligase NAD-dependent |
Protein accession | YP_003507451 |
Protein GI | 291296053 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.229082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC CTAAGCAGCG CATCATGGAA CTGCGGGAGC TGATTCGCTA CCACAATTAC CGCTATTACG TGCTGGACAA ACCGGAAATT TCCGATGCCG AGTACGACCG CCTGCTCCAG GAGCTGAGGG CCCTTGAAGA AGCCCATCCT GAGCTGATCA TCCCCGACTC CCCCACGCAA ACCGTGGGCA GCGCCATCCT CGAGACCCCC TTCACCCCCG TGCCCCACCC CACCCGTATG TACTCGCTGG GGAACGCCTT TTCGCAAGAC GACATCGCCG ATTTCGAGGC CAGCATCAAC CGCTTCCTGG GCCGGGAAGA GTCGCGCGAG TATGTGCTGG AGTACAAGAT TGACGGACTC TCGGTCAACC TCATCTATGA AGAGGGGGTG TTTCGCCAGG GGCTCACCCG CGGCGACGGC CTGACCGGCG AGGACGTAAC GCCCAACCTG CTAGCGATTC CCGACATTCC CCGGCAGCTA CCACAGCCCC TCGACCTCGA GGTTCGGGGG GAAATTTACC TACCCATCCA GACCTTTTTG GAGTTGAACA CGCAGCTCGA GGAGGCTGGG GAGCCTCCTT TCAAAAACCC GCGCAACGCC GCAGCCGGCA GCCTACGGCA AAAAGACCCC CGAATCAGCG CCAGCCGGGG CTTGCGGGGC CTGTTTTATG GGGTGGGAAG GCCGGAAAGC CTGGGGGTCG GCACCCAGCA AGAATTGCTG GAGAAACTAG GCCAGCTTGG TTTCTCCGTG GATCCGCATT ACCAGGTGGT GCGGGGCGTG GAGGGCATCG AGCAGGGCTA CCAGGCCATG CTGGCCGCGC GCAAAAGCCT GCCTTTTGAA GCCGATGGCG TGACCGTCAA GCTCAACAAT CTTTCCCTGT GGAGCGAGCT GGGCTACACC GCCAAAACCC CCCGTTTCGC CATCGCCTAC AAGTTCCCCG CCGAAGAAAA GACCACCCGG GTGCTGCGGG TAATCTTTCA GGTGGGGCGC ACCGGCCGGG TCACCCCGGT GGCGGAGCTC GAGCCGGTCT TTCTGGACGG CTCCACCGTG AGCCGGGTCA CCCTGCACAA CGAAAGTTAC GTACAGGAGC TGGGCTTACG CATCGGGGAT ACCGTGCTGG TACACAAATC GGGCGGGGTG ATCCCCGAGG TGTTGCGGGT GGTCACCGAG GCCCCCCGGG GGCATGCGCC CGTGGAGTGG CCCACCCACT GTCCCGAGTG CGGTACAGCC CTCGAGCTTT CGGGCAAGAT TCACCTCTGC CCCAACCCCC TATGCCCGGC CAAGGCTTTC GAGGCGATCC GGCATTTTGC CAGCCGCAGG GCCATGGACA TCCAGGGCCT GGGCGAGAAG CTGATTGAGC AGCTTTTGGA AACCGGTCTG GTGCGGGATG CCGCCGACCT CTACAACCTT AAGAAAGAAG ATATTGCCGC GCTCGAGCGC AAGGCCGAGA AAAGCGCCCA GAACCTTATT GAGCAGATCG AGGCCAGCAA AAGCCGGGGC CTCGAGCGGC TGCTCTTTGC GCTGGGCATT CCCCAGGTCG GCGAAAGCAC CGCCCGGGCC CTGGCCAAGC GCTTTGGGCA CCTGGACAGC ATCCTGAAGG CCACGGTCGA GGAGCTGGAT GCCGTACCGG ACATCGCCGA GACCACTGCC CAGGCCATCC ACCAGGCCCT GGCTCGCCCG GAGATGCAGA GCTTCATCGA GCGCCTGCGG GCCGCTGGTT TGGTGTTCGA GGCCAGAGAA AAGCAGCAAA GCCAGGCCCT CGAGGGTCTT ACCTTTGTCT TAACCGGCGA GCTCTCGCGC CCCCGGGAAG AGGTCGCGCG GCAGCTCGAG GCCCACGGGG CCAAAATTTC CGGCTCCGTG AGCAGAAAAA CCAGCTATGT GATCGCCGGG CCAGGGGCGG GCTCCAAGCT CAGCAAGGCC AAAGAGCTGG GCATTCCCAT TCTGGACGAA GCAGGCCTAC GGGCGCTGCT GGAGCAGAAA ATCGGCGCAG CCTCCATCTA G
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Protein sequence | MQTPKQRIME LRELIRYHNY RYYVLDKPEI SDAEYDRLLQ ELRALEEAHP ELIIPDSPTQ TVGSAILETP FTPVPHPTRM YSLGNAFSQD DIADFEASIN RFLGREESRE YVLEYKIDGL SVNLIYEEGV FRQGLTRGDG LTGEDVTPNL LAIPDIPRQL PQPLDLEVRG EIYLPIQTFL ELNTQLEEAG EPPFKNPRNA AAGSLRQKDP RISASRGLRG LFYGVGRPES LGVGTQQELL EKLGQLGFSV DPHYQVVRGV EGIEQGYQAM LAARKSLPFE ADGVTVKLNN LSLWSELGYT AKTPRFAIAY KFPAEEKTTR VLRVIFQVGR TGRVTPVAEL EPVFLDGSTV SRVTLHNESY VQELGLRIGD TVLVHKSGGV IPEVLRVVTE APRGHAPVEW PTHCPECGTA LELSGKIHLC PNPLCPAKAF EAIRHFASRR AMDIQGLGEK LIEQLLETGL VRDAADLYNL KKEDIAALER KAEKSAQNLI EQIEASKSRG LERLLFALGI PQVGESTARA LAKRFGHLDS ILKATVEELD AVPDIAETTA QAIHQALARP EMQSFIERLR AAGLVFEARE KQQSQALEGL TFVLTGELSR PREEVARQLE AHGAKISGSV SRKTSYVIAG PGAGSKLSKA KELGIPILDE AGLRALLEQK IGAASI
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