Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1664 |
Symbol | |
ID | 8879770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1698923 |
End bp | 1699645 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_003507445 |
Protein GI | 291296047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00697714 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.132461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCA AGCTGGATCC TCACTCCGCC ACCCCGCTTT ATCTACAGCT CGAGGCCCTT CTGCGTGAGG CCCTGGCCTC CAACACCTGG AAAGCCGGCG AGGCCATGCC CCCCGAGCGC GAGCTGGCCG AACGGTTTGG GGTCTCGAGG CTCACGCTGC GCAAAGCCCT CGAGCGCCTC GAGGCCCAGG GCCTGGTGCA GCGCCGCCAG GGGTCGGGCA CCTATGTGGC CCCCCGCCTC GAGCAGCCCC TCTCGGCGCT GACCAGCTTC AGCGAGGACA TGCGGGCGCG CGGCCTCGAG CCCAGCACGC GCTGGCTCAA ACGGGGGTTG TTCACCGCCT CCCCCGAGGA GGTGCTGGCC CTATCGCTCT CGCCAGGCGA GAAAGTGGCC CGGCTCGAGC GCGTGCGCAG CGCGCAGGGT GAGCCCATGG CTGTTGAGCG GGCCGCCTTG CCAGCCCACC TCCTCCCCCA CCCCGAACAG GTCAAAGAAT CCCTGTACGC CTATCTGGAG AGCAAAGGCT TACGGCCGGT TCGGGCCCTG CAACGCCTGC GCTCGGTCGC GGCCAGCCGC CAGGAAGCCG AGCTTTTGGG TCTTCGAGCA GGCGAACCGG TACTCTACAT CGAGCGCCTG AGCTACCTGG CCGACGGCAG CGTGCTGGAG TTTACCCGCA GCCACTACCG CGGCGACCGC TACGATTTCG TGGCCGAGCT ACGCCGGGCC TGA
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Protein sequence | MESKLDPHSA TPLYLQLEAL LREALASNTW KAGEAMPPER ELAERFGVSR LTLRKALERL EAQGLVQRRQ GSGTYVAPRL EQPLSALTSF SEDMRARGLE PSTRWLKRGL FTASPEEVLA LSLSPGEKVA RLERVRSAQG EPMAVERAAL PAHLLPHPEQ VKESLYAYLE SKGLRPVRAL QRLRSVAASR QEAELLGLRA GEPVLYIERL SYLADGSVLE FTRSHYRGDR YDFVAELRRA
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