| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1661 |
|---|
| Symbol | |
|---|
| ID | 8879767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1694984 |
|---|
| End bp | 1696066 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003507442 |
|---|
| Protein GI | 291296044 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.390668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.152299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGC GCAATAACCC CCTCTACCTG GCCTGGCGGC GCTTTTTGCG CTCCAAGCCG
GGGGTCATCA GCGGCGTAGT TCTAATTGCG CTGTACCTGG TGGCCTTCCT GGCCGGCTTC
CTGGCCCCCA ACAACCTGAC CGTGCAGCAC CCAGACGCTG TTTACCAGCC CCCCCAGCGG
GTCTACTTCT TCCGCGATGG CCGGCCCGTG CGGCCCTACG TGTACCAGCT CAAACGCGAG
CGCGACCCGG TTACCTTCAT CAGCACCTAC AAAGAAGACC GCACCCGGCC CACCCCCATC
CGCTTTCTGA TCGCCCAGGG CGAGCCCTAC CGCTTTTTGG GGTTCAAAAC CAACTGGCAC
CTGTTTGGGG TGGCCGAGCG CGAGGGGTAC TTTTTCCCTT TGGGCACCGA CCAGTTTGGC
CGCTGCCTCT TCTCGCGCAT CCTGGTGGGG TCGCAGGTCT CGCTCACGGT GGGGGTGGTC
GGGGTGCTGA TCTCCTTTGC TATCGGGATT TTGTTGGGGG GCATCTCGGG CTACTTTGGC
GGCTGGGTGG ATACCCTCAT CCAGCGCATC ACCGAGGTGC TACTCTCGAT TCCCCGGCTG
CCCATCTTGA TGGCCCTCTC CACGGTGATT CCGGCCAGTT GGCCCAGCAC CTACGTGTAT
CTGGGCATTA TTGCGGTGCT CTCGTTTATC GGCTGGGCGG GGCTGGCAAG GGTGGTGCGG
GGGCAGGTGC TGGCCCTGCG CGAGGTGGAC TACGTGACCG CCGCGGTGGC CCAGGGGGCC
TCCAACCTGC GCATCATCCT GCGGCACATC GTGCCCAACC TGAGCAGCTA CCTGATCGTG
ACCGCGACCC TGGCCCTGCC CGGCTACATT ATCGGCGAGT CGGCGCTGTC GTTTTTGGGG
CTGGGCATTA AGGAACCCAT GGCTAGCTGG GGTCTGCTCT TGAAGGATGC ACAAAACTTC
CAGTCGCTGA GCCTCTACCC CTGGTTGCTG ACCCCCGGCC TCCTGATATT TATCTCGGTA
CTGGCCTACA ACTTTTTCGG CGATGCGCTG CGGGACGCCG CGGATGTGCG CTCGAGGGAC
TAG
|
|---|
| Protein sequence | MDKRNNPLYL AWRRFLRSKP GVISGVVLIA LYLVAFLAGF LAPNNLTVQH PDAVYQPPQR
VYFFRDGRPV RPYVYQLKRE RDPVTFISTY KEDRTRPTPI RFLIAQGEPY RFLGFKTNWH
LFGVAEREGY FFPLGTDQFG RCLFSRILVG SQVSLTVGVV GVLISFAIGI LLGGISGYFG
GWVDTLIQRI TEVLLSIPRL PILMALSTVI PASWPSTYVY LGIIAVLSFI GWAGLARVVR
GQVLALREVD YVTAAVAQGA SNLRIILRHI VPNLSSYLIV TATLALPGYI IGESALSFLG
LGIKEPMASW GLLLKDAQNF QSLSLYPWLL TPGLLIFISV LAYNFFGDAL RDAADVRSRD
|
|---|
| |