| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1660 |
|---|
| Symbol | |
|---|
| ID | 8879766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1693201 |
|---|
| End bp | 1694970 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003507441 |
|---|
| Protein GI | 291296043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.299882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.183706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA GAAGGTTTTT ACGGCAAGCT GCGTTGGGAC TGGGCGCGGG GGTGCTGACC
CCGGGCCTCT GGGCCCGTGG GCTGGCCCAG GGTGGGGCTG CCAATGTTCC GGCCAACCTG
TTTCAGGAGA TTGGTCGGCG CGGGGGCACC CTGACCCTAC CGCTGGGATC CACTCCCCAG
AGCTGGAACT ACTTTGCGGT GATTGACAAC TTCGCCTACA CCGTGCTCAA CAACGTATTT
GATCGCCTGA TGCAGCTCGA CCAGATCAGC TTTGAGCTGG TGGGTGTTTT GGCTGAGTCC
TGGAGCATCT CCAAGGACGC CCGCACCACC ACCGTCAAGC TGCGCAGCGG TATCAAGTGG
TCGGACGGCA CCCCCTTCAC CGCCGACGAC GTGCTTTTCA CCTTTACCGA GGTGGCCTCC
AACACCAACC TGCGGGCCAA CCAGGCCGCC ACCCTCACGG TGGCCGGGGT GCCCTTGCGC
TTCGAGAAGG TCGACGACCT CACCTTCCGG GTGATCTCGA GCAAGCCCTA CGGGGCGGTG
CTGCAAGCCC TGACCTTCTC GCCCATCCTG CCGCGGCACA AACTGGCCCA GTTCAAGCCC
AAGGAAGACC CCGGCGGCTT CAGCCGGATC TGGGCCACCA ACACCGACCC CAAGGAGATT
GTGGGCACCG GGCCTTTTAT CCTGCAAAGT TACGTGCCCG ACCAGAAAGT CACCCTGGTG
CGCAACCCCA ACTCCTGGCG GCGCGACCCC CAGGGCAACC CACTGCCCTA CTTCGACCGC
CTCGAGTACC TGATTATCCG TGACCCCAAC GTGCAGATCG CCCAGTTCCG GGCCGGCAAC
CTCGACCAGG TGCCCATCAC CGGGGCCCAG TTCCCCGAGC TCAAGCGCCT CGAGGTGGGG
GGAGCCAAAA TCCGCGTGCT GAGCGGCAGC ACCATCTACA CCTCGCCCCC CCACTGGGGG
TTCAACTTCG ACGTCCCCAA CCCCGAGCTG CGCGAGTTTT TCCGCAACCT GACCTTCCGC
AAGGCCATGC AGTTTGCGGT CAACCGCAAG CGCATTATCG AGGATGTGTA CAACGGCCTG
GCAGTCTTGC CGGGGCATGG GGTGGCGCCG GGCACCTTCT GGTACTACGA CACCCGCAGC
TACCTGGGGG AGTTTAGCCT CGAGCGCGCG GCGGGCCTGC TGGACTCGCT GGGGCTGCGG
CGCGGCAGCG ACGGGCAACG ACGGCTGCCC AGCGGAAGGG TTCTCGAGTT TGCCTTTACC
TACGCCTCCG ACTCGGCCCC CTTTGCGGCC ATTGCGGCCA TCCTGCAAAA CGACCTGCGC
CAGATTGGGG TCAAGCTCAA CCTGCAAGGC ATCCAGCAGG GCACCTTGCT GGCAACCGCC
ACCGGCGGCA ACTTCGAAAG CATCCTGATG GCCTACGGCG ACCAGCCCGA CCCGCAGTTG
CGCAAGGACA TCTGGCAGCC GGGCGGCCAG CTCAACTACT GGCACCGCTC AGTCTGGCCC
GACCGGGGCA GCAGCGAGCC CAAGTTCGAC CAGATGTTCC CCTGGGAGAA AAACATCTGG
GAGATCTTCC GCCAGGCCGA GCAGCTCGGC GACCAGAACG AGCGCAAACG CCTCTACGAT
CGCTGGCAGC TTCTCTTTGC GCAGAACCTG CCCGTGATTA TGATTGCCAA ACCCACCGCC
GTGGCCGCCG GACACGCCCG TCTTGGCAAT TTCTTCGCCC GCGACAACCG CATCATCTTC
ACCAACTTCA GCATGTTTGA GAAAGCCTGA
|
|---|
| Protein sequence | MNRRRFLRQA ALGLGAGVLT PGLWARGLAQ GGAANVPANL FQEIGRRGGT LTLPLGSTPQ
SWNYFAVIDN FAYTVLNNVF DRLMQLDQIS FELVGVLAES WSISKDARTT TVKLRSGIKW
SDGTPFTADD VLFTFTEVAS NTNLRANQAA TLTVAGVPLR FEKVDDLTFR VISSKPYGAV
LQALTFSPIL PRHKLAQFKP KEDPGGFSRI WATNTDPKEI VGTGPFILQS YVPDQKVTLV
RNPNSWRRDP QGNPLPYFDR LEYLIIRDPN VQIAQFRAGN LDQVPITGAQ FPELKRLEVG
GAKIRVLSGS TIYTSPPHWG FNFDVPNPEL REFFRNLTFR KAMQFAVNRK RIIEDVYNGL
AVLPGHGVAP GTFWYYDTRS YLGEFSLERA AGLLDSLGLR RGSDGQRRLP SGRVLEFAFT
YASDSAPFAA IAAILQNDLR QIGVKLNLQG IQQGTLLATA TGGNFESILM AYGDQPDPQL
RKDIWQPGGQ LNYWHRSVWP DRGSSEPKFD QMFPWEKNIW EIFRQAEQLG DQNERKRLYD
RWQLLFAQNL PVIMIAKPTA VAAGHARLGN FFARDNRIIF TNFSMFEKA
|
|---|
| |