| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1647 |
|---|
| Symbol | |
|---|
| ID | 8879753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1678435 |
|---|
| End bp | 1679514 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003507428 |
|---|
| Protein GI | 291296030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.639332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.805866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGC GAATCTTAGA CCTGCGCAAG GAGGTTGACC GGATCAACCG CGAACTGCTC
CGTCTCCTCT CTGAACGCGG CAAGCTGGTG AGCGAGATCG GCCGGGTGCA AACCGAGCTG
GGCCTGCCCC ACTACGACCC CAAAAGGGAA GAGGAGATGC TGGCCTACCT GACCCGGGAG
AACCCGGGGC CCTACCCGGC TGAGACCATC AAGCGGCTAT TCAAGGAAAT TTTCAAGGCC
TCGCTGGACT TAGAAGAGCA GCAAGATAAA CAAAAATTCC TCTACTCACG CCAGGTCAAG
CCCGAGGACA CCACAGTTCG GGTTGGAGAT GTGGTCTTTG GCCGGGATAA GGTGCTGGTA
GCTGGGCCCT GCTCCATTGA ATCGGAAGAA CAGATGCTGC TCACCGCTAA GTTTCTGGCC
GGGCATGGGG TGAAGGTTTT ACGCGGTGGG GCCTACAAAC CCCGCACCTC CCCGTATGGC
TTTCAGGGTA TGGGGGAGCC AGCCCTCAAG ATAGGCCGTG CGGCTGCCGA TGCCAACGGG
ATGGTTTTTG TTACCGAGGT GATGGATACC CGCGATGTGG AACGGGTGGC CCAGTATGCC
GACATCCTGC AGGTAGGCAC CCGCAATGCG CAGAACTTTG CCCTGCTGCG TGAGGTGGGC
AAAGCCAACA AGCCGGTGCT GCTCAAGCGG GGTTTTGCCC AGACCATCGA GGAGTGGTTT
TACAGCGCCG AATATATACT TTCGCAGGGT AATTCCGAGG TGATCTTGTG TGAGCGCGGC
ATCCGCACTT ATGAAAAGTG GACCCGAAAC ACCCTCGATC TATCGGCGGC CATCCTGGCT
AAACAGCTCA CCCATCTGCC GGTGATTGTG GATGTGACCC ACGCGGCGGG GCGGCGGGAT
TTGCTGGCCC CCCTGGCTCG AGCCGCTCTG GCAGCCGGCC TGGATGGGGT GCATGTTGAG
GTGCACCCCA ACCCTAAAGT GGCCCTCTCC GACAACGAAC AACAGCTCGA CTTCGCCCAG
TTTGAGCAGT TTTTGCAGGC CATCGAAGAC CTCATGCCGA AGCCGGCCTC GAGGGTGTAG
|
|---|
| Protein sequence | MDQRILDLRK EVDRINRELL RLLSERGKLV SEIGRVQTEL GLPHYDPKRE EEMLAYLTRE
NPGPYPAETI KRLFKEIFKA SLDLEEQQDK QKFLYSRQVK PEDTTVRVGD VVFGRDKVLV
AGPCSIESEE QMLLTAKFLA GHGVKVLRGG AYKPRTSPYG FQGMGEPALK IGRAAADANG
MVFVTEVMDT RDVERVAQYA DILQVGTRNA QNFALLREVG KANKPVLLKR GFAQTIEEWF
YSAEYILSQG NSEVILCERG IRTYEKWTRN TLDLSAAILA KQLTHLPVIV DVTHAAGRRD
LLAPLARAAL AAGLDGVHVE VHPNPKVALS DNEQQLDFAQ FEQFLQAIED LMPKPASRV
|
|---|
| |