Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1559 |
Symbol | |
ID | 8879662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1594744 |
End bp | 1596486 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_003507341 |
Protein GI | 291295943 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.492536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0218748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCGTA CGCTTTACTG TGGGGAGTTA CGCGAACATC ATGCCGGTCA AACCGTGGTG CTGGAAGGCT GGGTCAACCG CAGGCGCAAC CTGGGTGGCC TGATTTTTAT AGACCTGCGC GACCGCGAGG GGCTGGCCCA GGTGGTGGTC AACCCCGAAG CCGCCTGTTT TAGCGAAGCC GACCGGGTGC GGGCCGAGTG GGTCATCCGC GTAGAAGGCT CGGTGCGCCT TCGCCCGGCC GATCAGCTCA ACGCTAAACT CGCCACCGGG GCGGTGGAGG TCATCGCTGA GCGGATCGAG GTACTGGCCG AAGCCAAAAC CCCGCCCTTC CCCATTGATG CGGGCTGGCG CGGCGAAGAC GACCCACACG TGGGCGAAGA GGTGCGGCTC AGAAACCGGG TGGTGGATCT GCGGCGCAGG CGCCTGCACC ACAACCTGCG GCTGCGGCAT AAGGTGGTTG CGGCAATTTA TCGCTTCCTG GACGCGCACG GGTTTATCAG TGTGGAGACC CCCTACCTCA CCCGTTCAAC CCCCGAGGGC GCACGGGACT TTCTGGTGCC CTCGAGGCTC GAGCCCGGCC ATTTCTACGC ACTACCCCAG TCGCCCCAAC TTTTTAAGCA GATGTTGATG GTGGCTGGCT ACGACCGCTA TTTCCAGATC GCCCGCTGCT TCCGCGACGA GGATCTGCGG GCCGACCGCC AGCCCGACTT CACCCAGCTC GACATGGAGA TGTCGTTTGT AACCCAGGAG GACATCATCG CGCTTAATGA GGAGCTGGCC GCTTTCATCC TGCGTGAGAC CCTGGGCCAG GAACCCCCCC TCCCCTTCCC CCGCCTGACC TATACCGAGG TGATGAACCG CTACGGCTCA GACAAGCCCG ACCTGCGCTT TGGGCTGGAG CTACAGGACG TAACCGAGGC CTTTAGGGGA GGTGAGTTTC GCGCGTTCGC CGGGGCCGAG GTGGTCAAGG CCCTGGTGGT GCCAGGTCTG CTATCACGCC GGGAGATCGA GGCCCTCGAG GCTACTGCAA AAACCAAAGG CGCCGCCGGC CTGGCCTGGG CCCGGTTCGA AAACGGGGCG CTATCGGGCG GGATTGCCCG CTACATCCCC GCCCACCTAC CCGAGCAACT GGGCCTCACC GAGGGACATA CCCTTCTGCT GGTGGCGGGC CCCTGGCGCA AAACCGTCGA GAGCCTGGGA GCGGTGCGGC TGGAGCTTGG ACGGCAGCTT GGCCTGATTG AGCCGGGCTT TAAGTTCCTG TGGGTGGTGG ACTTTCCGCT GCTGGAATGG GATGAGGAAG CCGGCCGCTG GACCTATATG CACCACCCTT TCACCAGCCC CAACCTGGAA GACCTGCACC TGCTGGATAC CGACCCCGGT CGGGTGCGGG CCTATGCCTA CGATTTCGTG CTCAACGGCA GCGAGATTGG CGGCGGCTCC ATTCGCATTC ATCGCCGCGA CCTGCAGGAG CGTATGTTTG CCTTGCTGGG CATCGGGCCA GAGGAAGCCC AGCAGAAGTT TGGGTTTCTG CTCGAGGCCC TATCCTACGG CGCGCCACCC CACGGGGGGA TCGCCTGGGG GCTGGATCGT TTCGTAGCCC ACCTGGCCGG TGAGGAGTCA ATCCGCGAAG TAATCGCCTT TCCCAAAAAC AAAGAGGGCA AGGAGACCCT CACCGGCGCC CCCGCCCCGG TGGACGAGGC GCAGCTGGCC GCAGTGGGAC TGGCCGTGCG GAGTGAGGTA TGA
|
Protein sequence | MRRTLYCGEL REHHAGQTVV LEGWVNRRRN LGGLIFIDLR DREGLAQVVV NPEAACFSEA DRVRAEWVIR VEGSVRLRPA DQLNAKLATG AVEVIAERIE VLAEAKTPPF PIDAGWRGED DPHVGEEVRL RNRVVDLRRR RLHHNLRLRH KVVAAIYRFL DAHGFISVET PYLTRSTPEG ARDFLVPSRL EPGHFYALPQ SPQLFKQMLM VAGYDRYFQI ARCFRDEDLR ADRQPDFTQL DMEMSFVTQE DIIALNEELA AFILRETLGQ EPPLPFPRLT YTEVMNRYGS DKPDLRFGLE LQDVTEAFRG GEFRAFAGAE VVKALVVPGL LSRREIEALE ATAKTKGAAG LAWARFENGA LSGGIARYIP AHLPEQLGLT EGHTLLLVAG PWRKTVESLG AVRLELGRQL GLIEPGFKFL WVVDFPLLEW DEEAGRWTYM HHPFTSPNLE DLHLLDTDPG RVRAYAYDFV LNGSEIGGGS IRIHRRDLQE RMFALLGIGP EEAQQKFGFL LEALSYGAPP HGGIAWGLDR FVAHLAGEES IREVIAFPKN KEGKETLTGA PAPVDEAQLA AVGLAVRSEV
|
| |