Gene Mrub_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1558 
Symbol 
ID8879661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1593341 
End bp1594627 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID 
Producthistidyl-tRNA synthetase 
Protein accessionYP_003507340 
Protein GI291295942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0108926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGG CCGTTCCCGG AACCAACGAC ATTTTCGCCC AGGCCAAGGA GTACCCTTTT 
CGAGAGCCGG TTTTTCGCTA CATCATATCC ACCGCCGAGG AAGTGTTGCG CGGAGCCGGG
GCTCAGATGG TATACACCCC CATTTTCGAA TACCTCGAGG TCTTTCAAAA GGGGGTGGGG
CTTACCTCCG ACATCGTGGT CAAGAAAGAG ATGTTTGTAT TCGAAGATCG GGGTGGGCGG
CTTTTGGCGC TGCGCCCCGA ACCGACCGCG GCCATCGTGC GGGCCTTCAA CGAACACGGC
ATGAAGGTCT GGCCCCAGCC GGTTCGGCTG TTCACCTGGG GGCCTATTTT TCGTGGTGAA
CGTCAGCAAA AAGGCCGCTA CAAGCAGTTT CACCAGGTCG ATTACGAGGC CCTGGGTTTG
TCGGATCCCT TGCTGGACGC CGAGGCCATC GCGCTGATGG TGCGAATTTA CAAAACCCTG
GGCCTCCGCA ACCTCGAGGT CAAGCTGGGC TCGGTGGGCG ACCCCGAGGA TCGCGTGCGT
TATAACCAGT ACCTGCGGGA GCTTTTTGGC CCCTATGCCA GTGATTTATC GGAGGACTCG
AGGGTTCGGG TCGAAGCCAA CCCCATGCGC ATCCTCGACT CCAAAAGCGA GCGCGACCAG
GCCCTCATTG CTGAGCTACA GCCCAAGCCT ATGCTGGAGT TTCTCGGCCC GGCAGCCCAA
AAATTCCACG AACAGGTATG CAACTACCTC GATCGGCTGG GGGTCGCCTA CACGGTGGAT
CCAAGCCTGG TACGGGGCCT GGACTACTAC GTTCGCACCG CCTGGGAGGT GCACCACGCT
GGGATTGGGG CCAAGTCGGC CCTGGGGGGT GGCGGCCGCT ACGACGGTTT GTCGGAGATG
CTGGGCGGCC CGCCGCTGCC CGGTGTGGGC TTCGGCATTG GGGTTGAGCG CCTGGCCATC
GCCCTCGAGC AAGAAGGGGT GGCTTTGCCG GCCGACCCCA GCCCCACCCT CTACCTGGCC
CCCCTGGACG AGGCGGCCAA AATCGAGGTG CTGGCCCTGG CCGAGCAGCT CCGGCCTAAA
ATTCATGTGG AGATCGGCTA TACCCCCAAA AGCCCACGCA AGGCCCTCGA GGACGCCCTC
AAGAAAGGGG CTCGCTATGT GGGCTTCATT GGTGAGGCCG AGCGGGCTCG AGGCGTGGTT
ACCCTGAAAC ACCTGGAAAC CGGCGAGCAA AGGGCGCTCG AGCCCCTACA GCTCCACAGC
CTATTCGAAG GCCCGGAGCT AAAGTGA
 
Protein sequence
MLKAVPGTND IFAQAKEYPF REPVFRYIIS TAEEVLRGAG AQMVYTPIFE YLEVFQKGVG 
LTSDIVVKKE MFVFEDRGGR LLALRPEPTA AIVRAFNEHG MKVWPQPVRL FTWGPIFRGE
RQQKGRYKQF HQVDYEALGL SDPLLDAEAI ALMVRIYKTL GLRNLEVKLG SVGDPEDRVR
YNQYLRELFG PYASDLSEDS RVRVEANPMR ILDSKSERDQ ALIAELQPKP MLEFLGPAAQ
KFHEQVCNYL DRLGVAYTVD PSLVRGLDYY VRTAWEVHHA GIGAKSALGG GGRYDGLSEM
LGGPPLPGVG FGIGVERLAI ALEQEGVALP ADPSPTLYLA PLDEAAKIEV LALAEQLRPK
IHVEIGYTPK SPRKALEDAL KKGARYVGFI GEAERARGVV TLKHLETGEQ RALEPLQLHS
LFEGPELK