Gene Mrub_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1550 
Symbol 
ID8879653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1582658 
End bp1583191 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003507332 
Protein GI291295934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.403206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00759922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACGGT TCCTGACCCT AACCAACCTG CTGGGCCTGC TGGTTCTGCT GCTAGGTGGT 
TGGGCTTTGT GGGCCCAGCA GGATGACGGC GGCTCGAGGT CGCTTAACCT CCCCTCCGAT
CTAGAACATC AGGGCCCCCG CATCATCCGG TTGCACTTCG CCAAAGATAC CGGGGATGGT
TTGGTGGTTG AGGAGCGCAC CATTCAGATG ACTGAAGGCG AGTACACCCT GGGGCGGGTG
ATGCAAGAGC TGGTACGGGG GCCGCAAATT CCCGGGGCGG CACCCCTGGT TCCTGCCGGT
ACCCCTGCCC CCACCGTCTT TTTGCGCGAC GGCACCGCTC TGGTAGACTT ACCCGCGGCC
TATGCGCGAC TGGGCTACGG CACAGCCGGC GAAACCGCCC TTATCTACGG TATAGCCAGC
ACCCTGCTGG AGTTTAGAGA AGTGGAACAG GTCAAGTTCC TTTTGGAGGG CCGGGAGGTG
GAAAGCCTCG GGCACCTCTC GCTGCTGGAT CCCTTTAAGC GCGCGGGTCA GTAG
 
Protein sequence
MRRFLTLTNL LGLLVLLLGG WALWAQQDDG GSRSLNLPSD LEHQGPRIIR LHFAKDTGDG 
LVVEERTIQM TEGEYTLGRV MQELVRGPQI PGAAPLVPAG TPAPTVFLRD GTALVDLPAA
YARLGYGTAG ETALIYGIAS TLLEFREVEQ VKFLLEGREV ESLGHLSLLD PFKRAGQ