Gene Mrub_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1505 
Symbol 
ID8879606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1538046 
End bp1539320 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content60% 
IMG OID 
Productisocitrate dehydrogenase NADP-dependent 
Protein accessionYP_003507287 
Protein GI291295889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0469387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACC AAAAAATCTC GGTTCCCGCT GGCGAAAAGA TCACCATCCA AGATGGCAAG 
CTGCACGTGC CCGATCAACC CATCATCGGC TTTATCGAAG GCGACGGCAC CGGCCCAGAC
ATATGGCGAG CCGCCCAGCC GGTGCTGGAT GCGGCGGTAG CCAAGGCCTA TGGGGGCAGA
CGCAAGATAG CCTGGGCCGA AATTTATGCA GGCGAGAAGG CCAACCAGGT TTACGGTGAA
CCCATCTGGC TCCCGGAAGA GACCCTCGAG TTCATCCGCG AGTACCTGGT CGCCATCAAA
GGCCCGCTCA CCACGCCGGT TGGGGGTGGG ATTCGCTCCA TCAACGTCGC CTTGCGCCAA
GAGCTCGACC TATACGCCTG TGTACGCCCG GTGCAGTGGT TCGAAGGGGT GCCCAGCCCG
GTGCGCCACC CCGAGCTGGT CAACATGGTG ATTTTCCGAG AGAACACCGA GGATATCTAC
GCTGGCATCG AGTTTCCCAA GGACAGCCCC GAGGTTAAAC GGTTCCTCGA GTGGTTCGAG
GCCGAGTTCC CCAAGTCCTA CGGCAAAATT CGCTTCCCTC AGACCGCCGG CATCGGTATC
AAGCCGGTAT CGGAAGAGGG CACCCATCGC CTGGTCGAGG CCGCTATCAA CTACGCCATC
GACAACGACC TGCCCTCGGT CACCCTGGTG CACAAGGGCA ATATTATGAA GTACACCGAA
GGCGCCTTCC GCGACTGGGG GTACGCCCTG GCTAAAAGCA AGTTTGGCGC CGTAGACCTC
GACGGGGGCC CCTGGCAAAC CATCACCAAC CCCAAAACCG GCCGGCAAAT TATCATCAAG
GACATGATCG CCGACAACTT CCTGCAGCAA ATCCTGCTGC GGCCGGCCGA GTACAGCGTG
ATTGCCACCC TTAACCTCAA CGGCGACTAC ATCTCCGATG CCCTGGCCGC CCAGGTAGGG
GGCATTGGCA TCGCGCCCGG CTCCAACGTC AACTACTACA CCGGGCACGC GGTGTTTGAA
GCCACCCACG GCACCGCCCC TAAGTACGCC GGCAAAGACC AGGTTAACCC CAGCTCGGTG
ATCCTCTCGG GTGAGATGAT GCTGCGCTAC ATGGGCTGGA CGGAGGCCGC CGATCTGATT
ATCCAGGCCA TGACCAAGAC CATCGCACAG GGCCGGGTTA CCTACGACTT CCATCGCCTG
ATGGTGGCCG AGGGCCGCAA CGCAACCCTG CTCAAATGCA GCGAGTTCGG CCAGGCGCTG
ATCGAAAATA TGTAA
 
Protein sequence
MAYQKISVPA GEKITIQDGK LHVPDQPIIG FIEGDGTGPD IWRAAQPVLD AAVAKAYGGR 
RKIAWAEIYA GEKANQVYGE PIWLPEETLE FIREYLVAIK GPLTTPVGGG IRSINVALRQ
ELDLYACVRP VQWFEGVPSP VRHPELVNMV IFRENTEDIY AGIEFPKDSP EVKRFLEWFE
AEFPKSYGKI RFPQTAGIGI KPVSEEGTHR LVEAAINYAI DNDLPSVTLV HKGNIMKYTE
GAFRDWGYAL AKSKFGAVDL DGGPWQTITN PKTGRQIIIK DMIADNFLQQ ILLRPAEYSV
IATLNLNGDY ISDALAAQVG GIGIAPGSNV NYYTGHAVFE ATHGTAPKYA GKDQVNPSSV
ILSGEMMLRY MGWTEAADLI IQAMTKTIAQ GRVTYDFHRL MVAEGRNATL LKCSEFGQAL
IENM