| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1497 |
|---|
| Symbol | |
|---|
| ID | 8879598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1528175 |
|---|
| End bp | 1529398 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003507279 |
|---|
| Protein GI | 291295881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.30393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00778895 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGGC CTGGCAACAA GATCTGGTTG TGGTTGGGGG TGGTCGCGCT CTTGCTGGCC
GGTTGCGGGC CGCGCCGGGC AGCGAATAGC GAAAGCCCTA CCTCTGCTGA GGAAGCGGTG
GCCCGCAGCG TCAAGGTGCG GGTGGTGCAG CCGGCGCGTG GGGTGCTCAG CACGGTGCGC
ACAACCGGGG CTATTCTTTC CCCAGCCCGC GAGAGCCAGG TGGGGGCGAC GGCCTCGGGT
AAAGTTTTGG AGGTAGCGGT AAGCGAGGGC AGCCAGGTGG CCCAGGGCCA GGTGGTTCTG
CGCCTTGACC CAGCCAACGC CCAGATCGCG CTGCGCAACG CCGAGCTGGC TTTGCAGCAG
GCCCAGGTGA ACCTCGAGCG GGCCCAGCGC TCGACCGCGG GCTCCCTGGC CCCCCTGCAG
GCCAGCCTGG AATCGGCCCA GGCCAACCTT CAGGTGGCCG AGCGGCGCTA CCGGGAAGGC
CAGCAACTCT TCCAGGCCGG GGCCATTGCC CAGGTGGAGC TGACCGGCCT CGAGGCCGCC
TACAACCAGG CCAAGGCCGC CTTCGACAAC GCCCGCGAGA ACCTGGCCCG CGCCCAGCGG
GCCTCCAGCG AAGACCTGGC CTTGCTGCGG CTGCAGGTGC AACAGGCCCA GAACCAGCTC
AGCCAGGCCC GGCGGGCCGT GGCCGATACC GAGGTAAAGG CCCCTTTTGC CGGTGTGGTG
GCGGAAATTT TTGTGAACCC CGGTGAGTTT GTGAGTGTGG GGCAGCGGGT TTTCAGGCTG
GCCGATACCT CGAGGCTCGA GGCCAGCTTC CGCCTGCCCC CGGAGGAGGC CGCCAGCCTA
CCGATGGGTC GTAAGGTCGA ACTGATCTAT GGGGGGCGCA GCTACCCCGC CACCCTGATT
AAAAGCAGCG AGGTGCCCGG CACCGACCGG CTCGTCGAGC TGACCGCGCA GGTGGAGGGC
GACCTGCCCC CCGGTGCCAG CGCACAGGTG CGGTATACCC TCAACCTGGC CCAGGGCAAC
CTGCTACCCG CCGGGGCACT GCGCACCGAG GGCCGCAGCA CCTACGTATT TGTGGTGCAG
GAGGGCAAGG CTGTACGAAC CCCGGTGCGG GTCTTGGGTG ATACCGGCGC CCAGGTGGCG
GTGGATGGGC TGGGCAGCCA GCCGGTGATC TTCCCGGTGC CCTCGAGCCT CAGCGACGGC
GATGCAGTGG AGGTGGTGCA GTGA
|
|---|
| Protein sequence | MGRPGNKIWL WLGVVALLLA GCGPRRAANS ESPTSAEEAV ARSVKVRVVQ PARGVLSTVR
TTGAILSPAR ESQVGATASG KVLEVAVSEG SQVAQGQVVL RLDPANAQIA LRNAELALQQ
AQVNLERAQR STAGSLAPLQ ASLESAQANL QVAERRYREG QQLFQAGAIA QVELTGLEAA
YNQAKAAFDN ARENLARAQR ASSEDLALLR LQVQQAQNQL SQARRAVADT EVKAPFAGVV
AEIFVNPGEF VSVGQRVFRL ADTSRLEASF RLPPEEAASL PMGRKVELIY GGRSYPATLI
KSSEVPGTDR LVELTAQVEG DLPPGASAQV RYTLNLAQGN LLPAGALRTE GRSTYVFVVQ
EGKAVRTPVR VLGDTGAQVA VDGLGSQPVI FPVPSSLSDG DAVEVVQ
|
|---|
| |