Gene Mrub_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1488 
Symbol 
ID8879589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1515557 
End bp1516300 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID 
ProductCas5 family CRISPR-associated protein 
Protein accessionYP_003507270 
Protein GI291295872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.107953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGTT TTCAGTTGGA AGTCTGGGGT GAGCTGGCCT GTTTTACCCG GCCCGAGTTC 
AAGGTGGAGC GCTTTAGCTA CCCCATCATC ACCCCCAGTG CGGCGCGGGG TATCTTCGAT
GCCATTTACC TCGACTTCGA CCCCCAGCAT AAAACGCCCC TGATGTACTG GCAGGTGCGC
CGCATCGAGG TGCTGAGCCC GGTGCGCTAC ATCAGCCTGA TGCGCAACGA GGTCAAGGAG
AAGGCCAGCG TGCGCAACAT CCAGGCCTGG ATGAAAGACC CCGGCAGCTT TGAGCCCCTG
TACGCCGACG CCACCAAGGA TGATACCGGC CAGGACACCA AGGGCCGCAC CCAGCGCCAG
ACCATGGCCC TTAAAAACGT GCGCTACCGC CTGACCGCCC AGGCCGTGCT CTACCGCGAA
GACCCCGCTT TGCGGCAAAA AATCGAGCAG AGTTTTCAAA GGCGGGCCCG GGCCGGCCAG
TGCATCTACC AGCCCTACCT GGGCTGCCGC GAGTTTACCG GCTATTTCCG GCTGGTCGAG
GATGAAGGGG CCGCCCCGGT ACCCTACAAC GAAAAAATCG GCTGGATGCT CTACGACGTC
TTCGACCTCT CGCACCCAGG TCGCCCGCTG CGCACCGACC GCGGCGAGAA ACCGAGCATC
AGCCTGTTCG AGGCCGAGGT GGTGCAGGGG GTGCTCGAGG TGCCCCCCTA CGAAAGCCCA
CAGGTTCGCA AAGGGGGTGG ATGA
 
Protein sequence
MRSFQLEVWG ELACFTRPEF KVERFSYPII TPSAARGIFD AIYLDFDPQH KTPLMYWQVR 
RIEVLSPVRY ISLMRNEVKE KASVRNIQAW MKDPGSFEPL YADATKDDTG QDTKGRTQRQ
TMALKNVRYR LTAQAVLYRE DPALRQKIEQ SFQRRARAGQ CIYQPYLGCR EFTGYFRLVE
DEGAAPVPYN EKIGWMLYDV FDLSHPGRPL RTDRGEKPSI SLFEAEVVQG VLEVPPYESP
QVRKGGG