Gene Mrub_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1478 
Symbol 
ID8879579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1505024 
End bp1505680 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003507260 
Protein GI291295862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.470243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAC TGGATGATAT ATTCCCAGAA ATAGTTCCAG CGCCCTCCCA GCCCCAGGAG 
CCCCTACCCC TAAGCGCCCT GGCCCAGTAC ACCTACTGCC CCCGCCGGGC GGCCCTGATT
CTGCTCGAGG GCGAGTGGGA GGACAACGAG TTCACCCTGC GCGGTACGCG CGCCCACGAG
AACGTAGACA TTCCGCAGGG CTTGCTGCGC GAGGGGGTCT GGGTGGAACG GGCTCTGCCC
TTGTGGTCGG AGCGGCTGGG GCTTACGGGC CGGGCCGATG TGGTGGAGTT TGTGGAGGGC
GTGCCCTACC CGGTGGAGTA CAAGGTAAGC AAGCGCTGGC CCCGCGAGCT GGCCCGCAAA
GCCGCCGAGG TGCAGCTATG CGCCCAGGCT CTGTGCCTGG AAGAGATGTT CGGCCAGAGC
GTGATGGAGG GGGCGCTGTT CAGCAAATCG AGCCAGCGCC GCCGGGTGGT GCAGTTTACC
CCCGAGCTGC GCGCGGCCAC CCTCGCCACC ATCAGCGCGC TGCGCAAGCT GTTGCAGCAG
GAGCGCCTGC CCCCTCCGGC TGCCGACGAA CGCTGCAAAC ACTGTTCTCT CTTGGGGGTA
TGTATGCCCG AGGTGCCGCA AGCGCTAAGG GCTTGGCGAA ACCAACAATG GTCATGA
 
Protein sequence
MDELDDIFPE IVPAPSQPQE PLPLSALAQY TYCPRRAALI LLEGEWEDNE FTLRGTRAHE 
NVDIPQGLLR EGVWVERALP LWSERLGLTG RADVVEFVEG VPYPVEYKVS KRWPRELARK
AAEVQLCAQA LCLEEMFGQS VMEGALFSKS SQRRRVVQFT PELRAATLAT ISALRKLLQQ
ERLPPPAADE RCKHCSLLGV CMPEVPQALR AWRNQQWS