Gene Mrub_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1477 
Symbol 
ID8879578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1504008 
End bp1505027 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003507259 
Protein GI291295861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.544523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG AGGTATTGAA CACCCTTTAC ATACAAACCC AGGGCGTGTA TTTGCGCCTC 
GAGGGCGACA CCCTGCGCAT TGAGCACGAA GACGTAACCC TACGCAACGT ACCCCTGCAC
CACCTAGGAG GGCTGGCACT GTTTGGCAAC GTGCTGGTTT CGCCTTACCT GCTGCACCGC
TGCGCCCAGG ACGGCCTCGA GGTCACCTGG TTCAGCGAGT CGGGCCGCTT CCAGGGGCGG
CTCGCGGGCC CGGTTTCGGG CAATGTGCTG CTGCGGCAGG CCCAGTACCG CGCGCTGGAC
AACCCATCGA GCAGCCTCTA CCTGGCCCAG CGCTTTGTAG AGGGCAAGCT CAAAAACGCC
CGCCTGGTGT TGCAGCGGGC GGTGCGGGAG CGCGGCGAAA CCGAGGCCCT GGCCCTGGCC
CTCTACGAGC ACGAAGCCGC GCTGCGCCAG CTTCCGCAAG CCCGCTCGTT GGACGAGGTG
CGGGGCCTCG AGGGCGGCGC GGCCAGCGCC TACTTTGCGG CCTTTGGCGA CCTTTTGCTC
TCGGGCGAGT TCCGCTTCGA TGGCCGCAAC AAACGCCCCC CGCGCGACCC GGTGAATGCC
CTGCTCAGCT TTGTGTATGC CCTGCTCACC ACCCAGTGCA CCGCGGCGCT CGAGGGGGTG
GGGCTCGACC CCCAGGCCGG TTTCTTGCAC GCCCTTCGCC CTGGACGCCA TGCGCTGGCA
CTCGATCTGC TGGAAGAGTT CCGGGCCTGG TGGGCCGACC GGCTGGCCCT GTCGCTTCTG
AATCGCAAGC AGCTAGCCCC CGAGCACTTT GAAGTACGTC CCGGTGGGGC CGTTTTGCTG
AACGAGGAGG GCCGAAAGGC AGTAATTGTG GCCTTCCAGA CGCGCCGCCT GGAGACCGTA
CAGCATCCGC TATTCAAAGA GCCTGTACCG GTGGGGTTGC TACCGCACAT CCAGGCCCGC
TTGCTGGCCC GCTATTTGCG GGGCGACCTT CCGCAGTACC TACCTTTTGT GGGGCGATAG
 
Protein sequence
MNSEVLNTLY IQTQGVYLRL EGDTLRIEHE DVTLRNVPLH HLGGLALFGN VLVSPYLLHR 
CAQDGLEVTW FSESGRFQGR LAGPVSGNVL LRQAQYRALD NPSSSLYLAQ RFVEGKLKNA
RLVLQRAVRE RGETEALALA LYEHEAALRQ LPQARSLDEV RGLEGGAASA YFAAFGDLLL
SGEFRFDGRN KRPPRDPVNA LLSFVYALLT TQCTAALEGV GLDPQAGFLH ALRPGRHALA
LDLLEEFRAW WADRLALSLL NRKQLAPEHF EVRPGGAVLL NEEGRKAVIV AFQTRRLETV
QHPLFKEPVP VGLLPHIQAR LLARYLRGDL PQYLPFVGR