Gene Mrub_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1472 
Symbol 
ID8879573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1499106 
End bp1500164 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003507254 
Protein GI291295856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.764307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGTA TTTTTGCTCT GATTATAGGT TTGGTCTCTT TGGGTTTGGC CCAACCTCGA 
GTGGGCAGTG AAAACGGCCT CACAAGGCTG GTATTCAGCC TCCCCAATAC AGCGAAATTT
AGCCTGAGTC GCCAGGGGAA CGAGCTCTCC ATCCGCTTCC AGGGCACCCC ATCCCGCAGC
CTGCGGGCCT TGCTTAACAC GCCCCAGGTG GTGGGCTACC GAGCCACCCC CAACCCAGGT
GGCACGGTTT ATGTGGTGAC CCTCAAGCCC GGTACAAATC ATCGAACCAT GGAGCTGGCC
GATCCCCGGC GTTTGGTGCT GGAGGTGCGC AGCAACACCG GCGTGCAACC CCGCCCCAGG
GCCGGCCCGC CCACCCCAGT GGTGGTGCTC GACCCCGGCC ACGGGGGCGT TGACCCTGGG
GCCATAGGGT TCGTGCGCGA AGAAGAGGTG GTGCTCGATG TGGCCCTCCG CACCAAGCGG
CTGCTCGAGG CCCGGGGCAT CCGGGTTCTT CTCACCCGCA GCACAGACCA ACACCTGTCG
GCCGACAAGG TCGCCGACCT GGGGCTGCGG GCTGCCATGG CCGACAGCAA GCGCACCCTG
TTCGTCTCCA TTCACGCCAA CGCATCCGGG CGGGCCGCCC AGGGCATCGA AGTGTACTAC
TTTGGCGAGA CCATCGACCA GCGGCTTCTG TCCAAGGCCA TCCTGGAAAA CGGTGGGGGC
TCCCTCGGGC AGCGTCTGAC CCAGGAAGCC CGCAGTGTGG CCCAGCGGCT CATGCGCGAC
CTGCTGGCCC AGGCCAACCT CAAGTTTTCC GAACAGCTCG CCCTCAAAAC CCTGCAGGCC
ATGGTGCGCG AGACCGGTGC GGTAAGCCGC GGGGTGCAGA CCGCCCCCTT CTACGTAATT
CGCAATGCCC GCATCCCCGC CATCCTGGTG GAAATCGGCT TTGTCAATCA CCCCACCGAG
GGCAAAAGGC TGGCCACCAG TACCTATCGG GACCAGTTGG CTAGGGGTTT GGCAGGAGGC
ATCGTGGCAT TTTTGAACAA CGGGAACGCC CAGCGCTAA
 
Protein sequence
MRCIFALIIG LVSLGLAQPR VGSENGLTRL VFSLPNTAKF SLSRQGNELS IRFQGTPSRS 
LRALLNTPQV VGYRATPNPG GTVYVVTLKP GTNHRTMELA DPRRLVLEVR SNTGVQPRPR
AGPPTPVVVL DPGHGGVDPG AIGFVREEEV VLDVALRTKR LLEARGIRVL LTRSTDQHLS
ADKVADLGLR AAMADSKRTL FVSIHANASG RAAQGIEVYY FGETIDQRLL SKAILENGGG
SLGQRLTQEA RSVAQRLMRD LLAQANLKFS EQLALKTLQA MVRETGAVSR GVQTAPFYVI
RNARIPAILV EIGFVNHPTE GKRLATSTYR DQLARGLAGG IVAFLNNGNA QR