Gene Mrub_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1407 
Symbol 
ID8879504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1443461 
End bp1444585 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content60% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003507189 
Protein GI291295791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0609363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0878514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAC GCGGCAAAGG CGAAGGCTCC ATCTTCCAGC GCAAGGACGG GCGCTGGGCG 
GCCTTCGTGA CCATCGGCTA CGGCCCGGAT GGCAAGCAGC GCAAACGCTG GGTGTACGGG
CGCACCCGGC GCGAGGTGGC CGAGGCCCTG GCCCGGCTGT TGCCCAGGGC TGGCTATGGG
CTGATTCAAC CCACCCGCTT GCGGCTGGGC GAGTGGCTCG AGCGCTGGGC GGATGAGCGC
GCCCGATCCA AAGGATTACG CCCTTCTACC GTTCAGAATT ACCGCAATTA TCAGCAGTTA
CTCAAGCCGC TAGCTGCCAC CCCCTTGACC CGCCTTTCCC CGCTGGCTAT CCGCGCTCGC
TTTGCAGAAC TGGCGGAACT CTCCCCTTCC ACCCGTCGCC ATTTGTACCA ATTCCTGCGA
GCGGCTTTGC GGGACGCGGT ACGGGTGGGT CTTCTGGAGG CAAACCCCAT GGACGCTGTA
GACCCTCCCA CTGGCGGCAC GGTGCGCCCT CCACGGGCGT GGAATCGGGA GCAGGTAAGC
GCATTTCTCG CAGCGGCCCA GGGCCACCGA CTGTATCCGA TGTTTTACGT AATGCTGACC
ACTGGATTGC GTATCGGGGA AGCCATGGCC CTACGCTGGC AGGATTGGCA AGGTGAGAAA
TTGTGGATTC GCCACACCCT TACCAAGCAA CGTACCCTGG GCCCTACCAA AACTTTGGGA
TCATCGGCCC CTATCTACCT TGACCTTGCT ACCCAAACCA TTCTGTCTGA ACATCGCACG
CGCCAGGCTG AAGAACGGGC TACTGCCAAG CGCTGGCTGG ATCATGATCT GATTTTCCCG
TCGGAGGTTG GTACTCCCCT CTCTTACCGC AATGTCATGC GCACGTTCCA GGCCCTAACC
GAACAAGCAA AGGTGCCACG AATCGGTTTG CATGGGTTGC GACACACGTA TACCTCGATG
GCTTTACAGG CAGGTCTTAG CCCCAAGCAG GTAGCCGACC GCTTGAGACA CAAAGATCCC
GCCCTAACCC TTCGGATATA CCAACACTTA CAAGAAGAAG ACCGGCGGCA GGCAGCACTG
AACCTTGACA CCTTATTACA CCTACAAAAA CAGAGGCTTA CCTAA
 
Protein sequence
MPRRGKGEGS IFQRKDGRWA AFVTIGYGPD GKQRKRWVYG RTRREVAEAL ARLLPRAGYG 
LIQPTRLRLG EWLERWADER ARSKGLRPST VQNYRNYQQL LKPLAATPLT RLSPLAIRAR
FAELAELSPS TRRHLYQFLR AALRDAVRVG LLEANPMDAV DPPTGGTVRP PRAWNREQVS
AFLAAAQGHR LYPMFYVMLT TGLRIGEAMA LRWQDWQGEK LWIRHTLTKQ RTLGPTKTLG
SSAPIYLDLA TQTILSEHRT RQAEERATAK RWLDHDLIFP SEVGTPLSYR NVMRTFQALT
EQAKVPRIGL HGLRHTYTSM ALQAGLSPKQ VADRLRHKDP ALTLRIYQHL QEEDRRQAAL
NLDTLLHLQK QRLT