Gene Mrub_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1403 
Symbol 
ID8879500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1439029 
End bp1440087 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_003507185 
Protein GI291295787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.227332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAACC CCACTACCAC CACCTCGAGC CCACTGTTTT TGCGAGCGGC CTGGGGGGAA 
GATACCCCCC GCGCCCCCCT CTGGCTGATG CGCCAGGCCG GGCGCTACCT GCCCGAGTAC
CGCGCCATCA AGGCCCGGGC CAGCTTCTGG GAGATGGTAA GAACCCCCGA GCTGGCCGCC
GAGATCACCC TACAGCCCCT GCGCCGTTTT CCGCTGGACG CGGCCATCCT CTTTAGCGAT
ATCATGACCC CCTTGCCGGC CATGGGGGTG CCGATCGAGT TCAACCCGGG GCCGGTGGTG
GCCGAGCCGC TGCGCACCCA GGCCCAGCTC GAGGCCCTGC GCCTGCCCGA ACCCCAGGAA
ATCGCTCCCT ACGTGGCCGA GGCCATCCGA CTGGTGCGGC GCGAGCTGGC CGGTAAGCCC
GTGGCCCTCA TCGGCTTTGC CGGGGCCCCC CTGACCCTGG CCACCTACCT GGTACAGGGG
AGCGGCGCCA AGGACTACGA GGAATTCCGC GCCTTTCTTC GCCAGGCGCC CCACCTGGCC
CACCAACTCT TACAAAAGCT CACCGAGCTA ACCATCCGCT ACCTGCGGAT GCAGATCGAG
GCCGGGGCCG AGGCCGTTCA GCTTTTCGAC TCCTGGGCCG GTCTGCACGA CCCGGATACC
TACCGCACCT TTGGCCTGCC CTACAATCAG AAAGTCCTGT CGGCCCTGGC CGGCCTGGGT
GTGCCGCGCA TCTACCTGGC GGTGGGGGCC TCGCACCTCT ACCCCTTGCT GGCCCTGCTG
CCCTGCGAGG CGGTGAGCGT GGACTGGCGC CTGAGCCTGG CCCAGGTGCG CCCCTTCTTC
CCGGCCCACA CCCTGCAGGG CAACCTCGAT CCGGCGGTCT TGCTGGCCCC GCTCGAGGTT
ATTACCCAGG AAGCCCACAA GGTGCTCAGG GCTGGTCTGG GCGGCCCCCA CATCTTCAAC
CTGGGCCACG GGGTGATTCG CACCACACCC CCCGAACACG TGGCCCACTT GGTCGAGGTG
GTGCATCAGT TCAACCGACA CAGCGAGGAA CCTGCATGA
 
Protein sequence
MKNPTTTTSS PLFLRAAWGE DTPRAPLWLM RQAGRYLPEY RAIKARASFW EMVRTPELAA 
EITLQPLRRF PLDAAILFSD IMTPLPAMGV PIEFNPGPVV AEPLRTQAQL EALRLPEPQE
IAPYVAEAIR LVRRELAGKP VALIGFAGAP LTLATYLVQG SGAKDYEEFR AFLRQAPHLA
HQLLQKLTEL TIRYLRMQIE AGAEAVQLFD SWAGLHDPDT YRTFGLPYNQ KVLSALAGLG
VPRIYLAVGA SHLYPLLALL PCEAVSVDWR LSLAQVRPFF PAHTLQGNLD PAVLLAPLEV
ITQEAHKVLR AGLGGPHIFN LGHGVIRTTP PEHVAHLVEV VHQFNRHSEE PA