Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1330 |
Symbol | |
ID | 8879426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1363917 |
End bp | 1364888 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
Protein accession | YP_003507112 |
Protein GI | 291295714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00370431 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.041902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA TGCCCAACAT CATCCGCATC GGCCACGGGG TGTTCTACGT GACCGATCTG GAGCGTTCGC GCCACTTCTA CGTAGATTTA CTCGGCCTGA ATGTGCTGCA CGAAAGCCAG AGCGCCCTGT ACCTACGCGG CACCGAGGAC CGCGAGTGGA CCCTCAAGCT CGAGCTGGCC CCCGAACCCG GCGTCAAGCA CCTGGGCTAC CGGGTGGCCG GCGAACTGGA TTTGCAACTC CTGGCCGAGC TGGCCCAGAC CCTGGGCCTC CCCCACCGCT GGGAGAGCGA GCAGGATCGG CCCAGAATGC TGCGCTTGCA AGACCCCTTT GGGGTTCCGG TGGCCTTCTA TGCCGAAAGC CAGAAGTACC CCTGGCTCCT GCAACGCTAC GACCTGCACA AAGGCCCCGG CATCCAGCGC ATTGACCACA TCAACGTGAT GACGCCGCAG GTGGAGGCCA TGACCCGCTG GTACATGGAT AAGCTGGCCT TCCGCCTCTC GGAGTACACC GAGGACGACG ACGGCCGAAT CTGGGCGGCC TGGATTCACC GCAAGGGCAA CGTACACGAC CTGGCCCTCA CCAACGGCAC CGGCCCCCGG CTGCACCACT TCGCCTACTG GATGCCCGAT GCCATGAGCA TCATCCGGGC CTGCGACATT CTGGCCGGGG CCAGAGAGAC CGAGGCCATC GAGCGCGGGC CAGGACGCCA CGGCGTCTCC AACGCCTTCT TCCTGTACCT GCGCGACCCC GACGGCCACC GCATCGAGCT GTACACCTCC GACTACAGCA CGGTAGACCC CGATTTCGAG CCCATCCGCT GGAGCCTCAA CGACCCCCGC CGCCAGACCT TGTGGGGGGC CAAAACCCCC AAGAGCTGGT TCCTGGAGGG CTCGCTTTTG GAGGCCTTCG AGGGCGGCTG GGTAGAGCCG CAGGAGTCGG AGTTACAGGG GCTGCCACAG CACGTGATCT GA
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Protein sequence | MTQMPNIIRI GHGVFYVTDL ERSRHFYVDL LGLNVLHESQ SALYLRGTED REWTLKLELA PEPGVKHLGY RVAGELDLQL LAELAQTLGL PHRWESEQDR PRMLRLQDPF GVPVAFYAES QKYPWLLQRY DLHKGPGIQR IDHINVMTPQ VEAMTRWYMD KLAFRLSEYT EDDDGRIWAA WIHRKGNVHD LALTNGTGPR LHHFAYWMPD AMSIIRACDI LAGARETEAI ERGPGRHGVS NAFFLYLRDP DGHRIELYTS DYSTVDPDFE PIRWSLNDPR RQTLWGAKTP KSWFLEGSLL EAFEGGWVEP QESELQGLPQ HVI
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