| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1121 |
|---|
| Symbol | |
|---|
| ID | 8879211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1128015 |
|---|
| End bp | 1129520 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_003506905 |
|---|
| Protein GI | 291295507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.644339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCC AACGCGCTTT TGGAATTTTG CTCCACCCCA CCAGTTTTCC GGGTCGCTGG
GGGATTGGGG CTCTGGGCCG CGAGGCCGAG CGGTTTTTGG ACTGGCTGGC CGATGCGGGA
GCCCGCTGGT GGCAGGTCTT ACCGCTGGGC CCTACCAGTT ACGGCGACTC GCCGTACCAG
TCCTTCTCGG CTTTTGCCGG TAACCCGTAT TTGGTTGACC CCGAGATGCT GATTGAAAAA
GGCTGGCTGG AACAAAGCGA AGCGCCCCCG CCGTATCCGA CCCAGCGCGT GGATTATGGC
TGGCTTTACC AGACCCGCTG GCCCCTGTTG CGGCGGGCTT TCGCGGGGTT TCGGGCAAGG
GCTTCGGCCC AGGATAAGAC CCGACTGGAA GCCTTTATCG AGGCCGAGCG CTTCTGGCTG
GAAGACTATG CGCTCTTTAT GGCCCTCAAG ACCCGGTTTG ACGGCAAGCC CTGGAACGAG
TGGAGCCCCG AGCTGCGCGA CCGTGAACCG GCTGCCCTGG CCAGGGCCCG TGAGGAGCTG
GCCGAGGAGG TGGCCCTTTA CGAGTGGATT CAGTGGCTTT TTTATCTGGA ATGGGGCCAG
ACCAAGGCCT ATGCCGAATC CAAGGGGATT CAGATTATCG GCGATATGCC CATCTTTGTG
GCCTTCGATT CCTCAGATGT CTGGGCCAAC CCGCAGTACT TCTACCTCGA GGCCGATGGC
AACCCCACGG TGGTGGCGGG CGTTCCGCCG GACTACTTCT CCGAAACCGG CCAGCTCTGG
GGCAATCCGC TCTATCGCTG GGATGTGATG GAAAGGGACA ACTTTGCCTG GTGGATTGCC
CGCATAAGGC AGTCGCTCAA GCAGTGCCAC CTGGTGCGCA TCGACCACTT CCGCGGGTTT
GAAGCCTACT GGGAGGTTCC GTTTGGCCGG CCCAATGCTG TGGAGGGGCG CTGGGTCAAA
GCCCCAGGGG AGAAGCTGTT TGCTGCGGTG CGGGCCCAAC TGAGCGATGC GCCCATCATT
GCCGAAGACC TGGGGGTGAT CACCCCCGAG GTGGAGGCTT TGCGCGATGG CTTCGGGTTC
CCCGGCATGA AGATTTTGCA GTTTGCTTTT TCCGGTGAGG ACAACGCCTT TTTGCCCCAC
AACTACCCCG CGCACGGCAA TGTGGTGGTG TACAGCGGAA CCCACGACAA CGACACCACC
CTGGGATGGT TCCGCACCGC GCCGGAGGCC GAGCGGGCCT TCATGCGGGC CTACCTGGCC
CGCTATGGCA TCCGTTGTTT GTCGGAATAC GAGGTCGCGG GCGCTTTGAT CGAGCTGGCC
TTCAAAAGCC CGGCCAAGCT GGCTATTGTG CCTTTGCAGG ACGTGCTGGG GCTGGGCCCC
GAGGCCCGCA TGAACTTCCC CGGACGGCTG GGGGACAACT GGGCGTGGCG CTACGCCGAA
GGCGACCTCG AGCCCGGTCT GGCCGCGGGA CTGCGGGCCC TGGCCGAGGC CAGCCAGCGC
GCTTGA
|
|---|
| Protein sequence | MQLQRAFGIL LHPTSFPGRW GIGALGREAE RFLDWLADAG ARWWQVLPLG PTSYGDSPYQ
SFSAFAGNPY LVDPEMLIEK GWLEQSEAPP PYPTQRVDYG WLYQTRWPLL RRAFAGFRAR
ASAQDKTRLE AFIEAERFWL EDYALFMALK TRFDGKPWNE WSPELRDREP AALARAREEL
AEEVALYEWI QWLFYLEWGQ TKAYAESKGI QIIGDMPIFV AFDSSDVWAN PQYFYLEADG
NPTVVAGVPP DYFSETGQLW GNPLYRWDVM ERDNFAWWIA RIRQSLKQCH LVRIDHFRGF
EAYWEVPFGR PNAVEGRWVK APGEKLFAAV RAQLSDAPII AEDLGVITPE VEALRDGFGF
PGMKILQFAF SGEDNAFLPH NYPAHGNVVV YSGTHDNDTT LGWFRTAPEA ERAFMRAYLA
RYGIRCLSEY EVAGALIELA FKSPAKLAIV PLQDVLGLGP EARMNFPGRL GDNWAWRYAE
GDLEPGLAAG LRALAEASQR A
|
|---|
| |