| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1113 |
|---|
| Symbol | |
|---|
| ID | 8879203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1118821 |
|---|
| End bp | 1120149 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003506897 |
|---|
| Protein GI | 291295499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.132762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA TTTTGCGCTA CCTCGGTTGG GCCCTGTTTG GGCTGCTGGT GGCCTGGGTG
CTTTTTGTTT ACTTCCCTGG CCTGCTGGCC CGCATCCAGC CCAACACCCC CCCGGGCTTC
ATTCGCGTTG AGAACGGCTG GGTCTATGCC CTGGGCGGTC TTTTGGTGGC CGTGGGCCTG
ATTGTGCTGT ACGCCTGGCT GGCCACCCTG GTGTCCAACC GGCGGGCCCA GCGCAAGCGC
AGTTTCTGGC CGCTGGTGGG GCAGGGGCTT ACGCACCTGT TCATGTTCCT GGTGCTGGTA
TTTGCCTACT ACCCGGTGCT GCAGATTCTG GCGGCTTCGT TTGACCCCCG CAACACCCTT
TACCGCATCC TGCCCCCCGC CAGCGACAAC CTGCTGGTGC GGGCTCGAGT GGTACCGGAC
TTTTCCCAGC TGAGCTGGGA AAACTACGCC AAGCTGTTCG ATGGTTTTAT TCTCTACCCC
TACCAGGCTT TTTTGCTCGT GGTCGCGGCG CTGTGCTTGT TGTTGGTGCT GGTGCTGGCC
GCCTACCGCC GCCTTATCGG CGATACCGAT AGCGACAGCA GCCTGGGGAA GCTGCAGGGG
CACAGCCTGG CGGCTTTTGC TATCCTGAGC TTCATCCTGG TCATTTTCCT TTCCCCTGAG
CAGTTCACCG GCCAGGGCAC CGAGGCCAAA TTCGTGCTCT GGGTGCGCAA TACCCTGTTT
GTCTCGGGCA TTACCGGCAT CCTGGCAGTG CTGCTCACGG CCACGGCGGG TTACGCCTTC
GCCCGCTTCA ACTTTCCGGG CCGTTACCCC ATGCTACTGG TCTTTATTTT CATCCAGATG
TTCCCCGGTT TCTTGGGGCT GGTAGCCACC TACGTTTTGA TCTCCAACCT GGGCCTGCTG
AACACCTTTA CCGGCCTGGT GCTGGCCTAC TCGGGCGGGA TTATCAGCTT CGGCACCTGG
GTGTATAAGG GGTTTTTGGA GAGCATCTCC AAAAGCCTGG AGGAAGCCGC CCTGATCGAC
GGGGCCAGCA AGTGGCAGGT GTTTACCAAA ATCCTGATGC CGCTTTCGGC CCCCATGTTC
GTGTTCATCT TCTTGTTGCA GTTTGTGGGT ACTTACTCAG AGTTCATCGT GGCCAACCTG
TTCCTCACCG GTGTGGACTC CTGGACGGTG GGGATGGGTC TGCGCAACTT CACCACCGGG
CAGTTCTCCA CCCGTTGGGG GCTGTTTGCG GCGGCCTCGG TGCTGGGTTC GCTGCCCATC
TTGCTGACCT TCTACGGCTT CCAGCGCTAC TTTGTTTCGG GGTATACCGC AGGCTCGGTG
AAAGAATGA
|
|---|
| Protein sequence | MAAILRYLGW ALFGLLVAWV LFVYFPGLLA RIQPNTPPGF IRVENGWVYA LGGLLVAVGL
IVLYAWLATL VSNRRAQRKR SFWPLVGQGL THLFMFLVLV FAYYPVLQIL AASFDPRNTL
YRILPPASDN LLVRARVVPD FSQLSWENYA KLFDGFILYP YQAFLLVVAA LCLLLVLVLA
AYRRLIGDTD SDSSLGKLQG HSLAAFAILS FILVIFLSPE QFTGQGTEAK FVLWVRNTLF
VSGITGILAV LLTATAGYAF ARFNFPGRYP MLLVFIFIQM FPGFLGLVAT YVLISNLGLL
NTFTGLVLAY SGGIISFGTW VYKGFLESIS KSLEEAALID GASKWQVFTK ILMPLSAPMF
VFIFLLQFVG TYSEFIVANL FLTGVDSWTV GMGLRNFTTG QFSTRWGLFA AASVLGSLPI
LLTFYGFQRY FVSGYTAGSV KE
|
|---|
| |