Gene Mrub_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1084 
Symbol 
ID8879173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1090364 
End bp1091215 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003506868 
Protein GI291295470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0125965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0422522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTTT TTGTGACCGG GGGAACCGGT TATTTAGGGA GTACGCTGCT GCGGCTGGGG 
TCGGGTCGGC CCTGGGTTTT GGGTGCCAGT TACTGGAGCC AGCCGCCGGC GGTGCCGGGG
GTGGCCTGGG TGCGGCTGGA TGTACGGGAT GCGGCGGCGG TGGAGCAGGC CTTGAAGGAG
TTTCGTCCCG AGGTGGTCAT CCACACCGCC TACAGCAAGG CCAGTCCAGC GGCGCTCGAG
GCCATCACCG TACAGGGCAC GGTTCATGTG GCCCGGGCCT GCCGGGCTCT TGGGGCCCGG
CTGATCCACC TCTCCACCGA CCAGCTTTTC GATGGCGAAA ACCCGCCCTA TGCCGAGTCG
GCTGCGCCCA ACCCCCTCAC CGAGTACGGC CAGGCCAAGC TCAGGGCCGA ACACTGGGTG
CAGGCGATAC TCCCCACCGC CACCATCGTC CGCACCTCGC TCATCTGGGG CCTGAACCCC
CTCGACGTGA CCAGCCAGAT GGTGCTGGAG TTGGCCGATG GCAAGCGGGA GGGCGGGCTT
TTTAGCGACG AGTACCGCTC CTTTGTGTAC GTAGAGGATC TGGCCCAGGC CCTGGGGGAG
CTGGTGGGTC TGGACTATGC GGGCATCCTG CACCTGGGGG GTGCGGAGGT GTTGAGCCGG
CTCGAGTTTG GACGACTGAT TGCCCCTTTC CACGGACGCG ACCCGGCCCG ACTTCCGGCC
CAGCGCCGCG CCGAGTTTCC CGGCCTACGT CCCGGTAATT GTGCGCTGGA TAGCTCGCTG
GCTCAGTCCC TGCTCCAGAC CCGGCTGCGC GGGGTGCGGG AAGTGTTGCG CGCGCACCGC
CCTGTGGGAT AA
 
Protein sequence
MRVFVTGGTG YLGSTLLRLG SGRPWVLGAS YWSQPPAVPG VAWVRLDVRD AAAVEQALKE 
FRPEVVIHTA YSKASPAALE AITVQGTVHV ARACRALGAR LIHLSTDQLF DGENPPYAES
AAPNPLTEYG QAKLRAEHWV QAILPTATIV RTSLIWGLNP LDVTSQMVLE LADGKREGGL
FSDEYRSFVY VEDLAQALGE LVGLDYAGIL HLGGAEVLSR LEFGRLIAPF HGRDPARLPA
QRRAEFPGLR PGNCALDSSL AQSLLQTRLR GVREVLRAHR PVG