| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1081 |
|---|
| Symbol | |
|---|
| ID | 8879170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1086294 |
|---|
| End bp | 1088129 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | oligoendopeptidase F |
|---|
| Protein accession | YP_003506865 |
|---|
| Protein GI | 291295467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.142935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGA TGAGTACCTT ACCCAAACGC TCGGAGCTAC CCAAAGAACA GACCTGGAAC
CTGGAAGCCC TGTTTGCCTC CGAAGACCAC TGGCGGGCCG CCCTGGAAAA AGCGGCCCAA
AGCGTAGAGG AGGTCAAGCC GTTTGCCGGG CGGCTGGCCG AGTCGCCGCA GGTGCTGCTG
CAGGCCCTGG AAACCTACTA CACCCGGATG CTGGAGGCCA TGAAGGTGGC CCAGTACGCC
TCGCTGCAGC TCTCGACCGA GGGCACCAAC CCCCATTTCA TCCGCATGGT GGGCGAGGCC
CGCGCCGTGG TTGCAGCGCT CGCCGCCGCC GGGGCCTACC TCGAGCCCGA GCTATTGAGC
CTGCCCAAAG AGACCCTCGA GACTTTCATG CAGGCCGAAC CGGGCCTGGC CGTCTACCGG
CACTACTTCG AAGCCCTGCA AGCCCGCAGG CCCCACGTGC GCAGCAGCGA GGTGGAGACC
GTGCTGGCCG CCGTCTCCGA TCCCCTGGGC GGGCACAGCG CCACCGCTGC GGCGGCCACC
AACGCCGATA TGCAGTTCAG GCCGGTGGAG TACCAGGGCC AGACCCTCCC GGTCTCCCAC
AGCACCATCG GCGAGCTTCT GGTGCACGAG AGCCCCGAGG TACGCCGGGC TGCCTGGGAG
TCCTACGCCG ATGGGCATCT GGCCTTCAAA AACACCCTGG CCTCCACCCT GCAGGGTAGC
GTCAAGAGCT TTGCCTTCCA GGCCCGCACC CGCGGCTATG CCAGCAGCCT CGAGATGGCC
CTGGCGGTAA GCCGCACCTG CGGTGACAAC ATCCCCAAAG CCGTCTTCGA CAACCTGCTG
GCCACCTTCC AGGCCCACCT GCCCACCTGG CACCGCTTCT GGCGCATCCG CAAAAAGGCC
ATGGGCGGCC AGCTCAGAAG CTACGACGCG CCGGCCCCCC TGGTGCCAAG CCCCAAAATC
ACCTTCTGGG AGGCCGCCGA GACCATCTGC CGGGGCATGG AACCCCTGGG GCGGGAGTAC
GTAGAGCCCA TGCGCCGGGG CCTGTTCGAG GAGCGCTGGG TGGACTGGGG GCAGAACCAG
GGCAAGCGGG CCGGGGCCTT CTCCTCAGGG CTCAAGGGCA CCTTCCCCTA CATCTTCATG
AGCTGGTCGG ACGACCTCTT CTCGCTGAGC ACCCTGGCCC ACGAGCTGGG CCACTCCATG
CACAGCTACT TCACCCGGCA AACCCAGCCC ATCGTGTACG CCCGCTACAG CCTGTTCGTC
GCCGAGGTGG CCTCCAACTT CAACCAGGCC ATGGTGCGGG CCATGCTGCT GCGCGAGGCC
CCGACGCCCG AGTACAAGCT GGCGGTGCTG GAGGAGGCCT TTAGCAACTT CCACCGCTAT
TTGTTTGTGA TGCCCACCCT GGCCCGTTTC GAGCTCGAGC TCTACCAGCG CATCGAGAAA
GGCGGAGCCC TCACCGCACC CTTCCTGATC GAGCGGCTGG CCGAACTCTT CGCCGAGGGC
TACGGCGGCG AGGTGGAGCT GGACAAAGAA CGCCTGGGTG CGGGCTGGAT GAACTTCTCC
CACCTCTACA GCCCCTTTTA TGTCTACCAG TACGCCACCG GCATCGCCGC TGCCAATGCC
CTGGCCAAGG ATGTACTGGA GCAGGGCGAA CCCGCTGCCA AACGCTACCT GGACTTCCTC
AAGGCCGGCG ACTCGGTCTA TCCGCTGGAC GCGCTGAAAA TCGCTGGGAT TGACATGAAC
AGCCCCGAGC CGGTGGAGCG GGGGTTTGCG GTGCTAGCGA GCATGGTGGA CGAGCTCGAG
CGCCTGGTGG ACTCAAACCT GCAGACAACG CGCTGA
|
|---|
| Protein sequence | MPWMSTLPKR SELPKEQTWN LEALFASEDH WRAALEKAAQ SVEEVKPFAG RLAESPQVLL
QALETYYTRM LEAMKVAQYA SLQLSTEGTN PHFIRMVGEA RAVVAALAAA GAYLEPELLS
LPKETLETFM QAEPGLAVYR HYFEALQARR PHVRSSEVET VLAAVSDPLG GHSATAAAAT
NADMQFRPVE YQGQTLPVSH STIGELLVHE SPEVRRAAWE SYADGHLAFK NTLASTLQGS
VKSFAFQART RGYASSLEMA LAVSRTCGDN IPKAVFDNLL ATFQAHLPTW HRFWRIRKKA
MGGQLRSYDA PAPLVPSPKI TFWEAAETIC RGMEPLGREY VEPMRRGLFE ERWVDWGQNQ
GKRAGAFSSG LKGTFPYIFM SWSDDLFSLS TLAHELGHSM HSYFTRQTQP IVYARYSLFV
AEVASNFNQA MVRAMLLREA PTPEYKLAVL EEAFSNFHRY LFVMPTLARF ELELYQRIEK
GGALTAPFLI ERLAELFAEG YGGEVELDKE RLGAGWMNFS HLYSPFYVYQ YATGIAAANA
LAKDVLEQGE PAAKRYLDFL KAGDSVYPLD ALKIAGIDMN SPEPVERGFA VLASMVDELE
RLVDSNLQTT R
|
|---|
| |