| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1062 |
|---|
| Symbol | |
|---|
| ID | 8879151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1063472 |
|---|
| End bp | 1064809 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | TrkA-N domain-containing protein |
|---|
| Protein accession | YP_003506846 |
|---|
| Protein GI | 291295448 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.121384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCG TAATTGCCGG CGGCGGCGAG ATCGGCTCAC AGATTGCTAA AGCCCTGCAC
ACCCAGCACG ACCTGGTGGT GGTGGACACC AACCCCGAGG CCAAGGAGCG CCTGGGGGGG
TTGGACGTGC AGGTGGTGAT TGGGAGCGTC ACCGACCCCG AGATTCTGCG GGAAGCCAAG
GTAGATCTGT GCGACACCTT TATCGCCACC ACCAACTGGG ACGAGGTCAA CCTGATTGCC
TGCATGCTGG CCAAGGGCCT GGGGGCCAAG GAAACCCTGT GTTTTGTGGG AAAGCAGTCC
TATGTGGATA TCCTGACCGA CCCGCGCACG GTGGAAATTC TGGGCACCCG CATCGACCAG
GTCTTCTGGC CCCAACGCTC GCTGGCCAAA GAAATTGTAG AGGTCATCCG AATCCCTGGG
GCGGTGGACA CCGAGGTGCT GGCCGGTGGC CGGTTGCGCT TTGTGGAGTA CCAGGTGCGG
GAGGGCGGCC CCTACATCGG CAAGCAGCTC GCCCTGCTGG ACTGGCCTCC GGGCAGCCTG
CTGGCCGGTA TTTTGCGCGA GGGCCGTTTT ATCGCGGCCA CCGACCCCGA GTTTGCCCAG
CTCGCCCTCG AGGCCGAGGA TCGCATCTTC TTCATGACCA CCCCCCAGGG CTTCGACGCC
ATCCAGGCCT GCTTCGCTCC GCGCGAACGG GTGCGCCGGG TGATGGTGGT GGGGGGCGGC
AATGTGGGGT ACATGGTCAC CAAAGAACTG CTCAAGCACC GCCTCGAGGT CACCGTTATT
GACCACAACC CCGACCGCTG CGCCTGGCTG GCCGAACACC TGCCGGGGGC GCTGGTGCTC
GAGGGCGACG GCACCGACCT GGAGCTGCTG GAGTCCGAAG GCCTCGACCA TGTGGACGTG
ATGGTAGCGG TCACCGAAAA CGACGAGAAA AACCTGCTGG TCTCACTCCT GGCCAAGCAG
GTTGGGGTAG CCAAGGTGAT CACCCGGGTT AACCGGGGCG AGAACCGCCG CCTCTTCGAG
CACGTGGGCA TTGACATCCC CCTCACCCCC CGCGCCGCGG CGGTGCGCGA GGTGGTGGAC
TGGATCGCCC CCGACAACGT AGACCATCTG GCGCTGATCG AAGACCAGGT CGAGCTGCTG
GAATTCGAGC TGCCAGCCGA CTTCCGCGAA ACACCCTTCG ATAAGCTCCA GCTCCCCCAG
GGGGCCATTG CGGTGGCCCT CGAGCGCGGT ACCCGGGTCT ACCTGCGCTC CCCCATGCTG
GCCGTTACCG GTGGCGATAA ACTCCTGGTT CTTACCGACC GGCAGGTAGC CAATGAAGTC
CTGGCCCAGG TTCGCTAA
|
|---|
| Protein sequence | MYIVIAGGGE IGSQIAKALH TQHDLVVVDT NPEAKERLGG LDVQVVIGSV TDPEILREAK
VDLCDTFIAT TNWDEVNLIA CMLAKGLGAK ETLCFVGKQS YVDILTDPRT VEILGTRIDQ
VFWPQRSLAK EIVEVIRIPG AVDTEVLAGG RLRFVEYQVR EGGPYIGKQL ALLDWPPGSL
LAGILREGRF IAATDPEFAQ LALEAEDRIF FMTTPQGFDA IQACFAPRER VRRVMVVGGG
NVGYMVTKEL LKHRLEVTVI DHNPDRCAWL AEHLPGALVL EGDGTDLELL ESEGLDHVDV
MVAVTENDEK NLLVSLLAKQ VGVAKVITRV NRGENRRLFE HVGIDIPLTP RAAAVREVVD
WIAPDNVDHL ALIEDQVELL EFELPADFRE TPFDKLQLPQ GAIAVALERG TRVYLRSPML
AVTGGDKLLV LTDRQVANEV LAQVR
|
|---|
| |