| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1021 |
|---|
| Symbol | |
|---|
| ID | 8879110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1015858 |
|---|
| End bp | 1017873 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003506805 |
|---|
| Protein GI | 291295407 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.32204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGG TCTTCCCCTC CCCCGAGGTC TTGCGGCCCC GCGCACCCTT CTCGCGCTGG
GATCTGGTGG TGATTCCGGG GGTCTTGGTG CTCCTGCTCC TGCTCACCCT GGCCCTGCGG
GGGGCCACCG CCCCCTATGG CCCCAACACC CCCGACCTCA CGGTGAGCCT GAACCCGGCC
CACCTGCCCT ACTACGGCCT GCGCACCCTG CTGCGGATGC TGGCCGCCCT CCTGCTCTCG
CTGGCCTTTA CCCTGGTCTA CGCCACCATC GCCGCCAAGG TGCCGCGCAC CGAGCGGGTG
CTCATCCCCC TTCTGGACTT TTTGCAGTCG CTGCCCATCC TGGGCTTCCT TACCGCCACC
ACCGCCATCT TTTTGGGGCT GTTCCGGGGG AACCTGTTCG GCCTCGAGGC CGCCAGCATC
TTCGCCATCT TTACTTCCCA GGTCTGGAAC ATGACCTTCA GCTTTTATGC CTCGCTGCGC
ACGGTGCCCA GGGAGCTGCA GGAGGCCGCG GCCATGCTCC GGCTCTCCCC CTGGCAGCGC
TTCTGGAAGC TGGAGGTGCC CTTCGGCCTG CCCAACCTGG TCTGGAACGC CATGATGTCG
GTCTCGGGGG GCTGGTTTTT CGTGGTGGCC TCGGAGGTGA TCAGCGTGGT GGGGCGCGAC
CAGGATCAGT ACCTGCCAGG GGTGGGGGCC TACATCGCCC TGGCCATCCA GCAGGCCGAC
GCCCAGGCCA TGCTCTGGGC CGGGCTCACG CTGTTCTTGT TGGTGCTGCT CTACGACCAG
CTCCTCTTCC GCCCGGTGGT GGCCTGGGCC GAGAAGTTCA AGTTCGAGCA GTCCGAGTCC
AGCGACACCG CCCAGTCCTG GGTGCTGACC CTCCTGCAGC GGGCCCGCTT CTCCCAGCGC
ATCGCCCGGC TGCCCCAACC CCTCTGGGAG TGGCTGTGGC TCAAAAGCGC CCGCGGCCAC
CGGCCTGGGG TGGCCCTCGA GCCGCCCCCA AAGCCACGGT TGCGTTCCCA CCTGGCCGAC
CTGGGGTTCA ACCTGCTCAT TGCCCTGGGC TCGCTGGCGC TGGTGGGCGG GCTCCTGGGC
TACCTGCTGG GCCCCGGCCT GGGCTTTGGG AATGGGCAGA TGCTACGGCC CAACCCCAAC
CTCAACACCC AGCTATCGCC CGAGATCGCC CAGCGCTTCG CGGCCCTGGG CATCGCCCCC
GGCGCCGACG GGAGCGTCTG GCTCTCCCAG TTGTGCGCGG CCAGCAGGGA CGGACAGGCG
CTGAGCAGCG GCCTCAAGGC CCTTCTGGAG ACGCCAGGGG TCTGGGCCCC GGCCAACCTG
GCGGCGGCCT GCCAGGCCCC GCTGGCCCCG GCGGGCAAGG TGGCCTGGCC GGAGGTGCTC
GAGGTGTTCA AGCTGGGCTT CTTCACCGCC CTGCGGGTGA CCTTCTTCGT GCTGCTGGTC
ACGCTGATCT GGCTGCCCAT CGGGGTCTAC GTGGGCCTGC GGCCCCGCCT CACCCAGTGG
GTGCAGCCCC TGGCCCAGTT TGGCGCGGCC TTCCCGGCCA ACCTGCTCTT CCCCCTCTTT
GTGGTGGCCA TCGCGCACTT CCGGCTCAAC CCTGAGATCT GGGTCTCACC CCTGATGGTG
CTGGGGGGGC AGTGGTACAT CCTGTTCAAC GCCATCGCGG GCAGCGCGGC CATCCCCAAC
GACCTCAAAG AGGCCGCCCG CCTCTATGGC CTGCGGGGGT GGAACCGCTG GCGGCGGCTG
ATCCTGCCGG CCATTTTCCC CGCTTTCGTA ACCGGGGGCA TCACCGCGAC CGGGGGTAGC
TGGAACGCCA GCATCGTGGC CGAGGTGGTG CAGTGGGGCG ATACCACCCT GGTCGCCACC
GGCCTGGGGG CCTACATCGC CCGCTGGAGC ACCGGCGAGT TCAACCCCCA CGTGGGGCTA
GGGATGCTGG TGATGGGCCT GTGGGTGCTG GCCTACAACC GGCTGATCTG GCAGCGGCTC
TACCAGTTGG CCGAGGAACG CTACCGGCTG GACTAA
|
|---|
| Protein sequence | MRRVFPSPEV LRPRAPFSRW DLVVIPGVLV LLLLLTLALR GATAPYGPNT PDLTVSLNPA
HLPYYGLRTL LRMLAALLLS LAFTLVYATI AAKVPRTERV LIPLLDFLQS LPILGFLTAT
TAIFLGLFRG NLFGLEAASI FAIFTSQVWN MTFSFYASLR TVPRELQEAA AMLRLSPWQR
FWKLEVPFGL PNLVWNAMMS VSGGWFFVVA SEVISVVGRD QDQYLPGVGA YIALAIQQAD
AQAMLWAGLT LFLLVLLYDQ LLFRPVVAWA EKFKFEQSES SDTAQSWVLT LLQRARFSQR
IARLPQPLWE WLWLKSARGH RPGVALEPPP KPRLRSHLAD LGFNLLIALG SLALVGGLLG
YLLGPGLGFG NGQMLRPNPN LNTQLSPEIA QRFAALGIAP GADGSVWLSQ LCAASRDGQA
LSSGLKALLE TPGVWAPANL AAACQAPLAP AGKVAWPEVL EVFKLGFFTA LRVTFFVLLV
TLIWLPIGVY VGLRPRLTQW VQPLAQFGAA FPANLLFPLF VVAIAHFRLN PEIWVSPLMV
LGGQWYILFN AIAGSAAIPN DLKEAARLYG LRGWNRWRRL ILPAIFPAFV TGGITATGGS
WNASIVAEVV QWGDTTLVAT GLGAYIARWS TGEFNPHVGL GMLVMGLWVL AYNRLIWQRL
YQLAEERYRL D
|
|---|
| |