Gene Mrub_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1020 
Symbol 
ID8879109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1014530 
End bp1015843 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter-like protein 
Protein accessionYP_003506804 
Protein GI291295406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.381169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA ACCGCAAAAC CTTGCTAGAG GCCAGAAACC TGACCAAAAC CTTCACCACC 
CCCGAGGGCA AACCCTTCAC CGTGCTCGAG GGCATCCACC TCGAGCTCCA GGAGGGCGAG
ATCGTAGCCC TCTTGGGCCG CAGCGGCTCG GGCAAGAGCA CTCTTTTGCG CTGCCTGAGC
GGGCTGTTGC GGCCCTCGGC AGGCGAGGTG CGCTACCGGG GCCAGCCGGT GCAGGGGCCC
ATGCCGGGCA TGGCCATGGT CTTCCAGAGC TTTGCCCTCT TCCCCTGGCT CACCGTGCAG
CAAAACGTGG AGCTGGGCCT GGAGGCAATG GGCATCCCCG CCCCCCAGCG CCGCCAGAAA
GCCCTGGAGG CCATTGACCT GGTGGGGCTG GACGGCTTCG AGAAAGCCTT CCCCAAGGAG
CTCTCCGGCG GCATGCGCCA GCGGGTGGGC TTTGCCCGGG CCCTGGTCAC ACAGCCCGAG
GTGCTCTTTA TGGACGAGCC CATGAGCGCC CTGGATGTGC TCACCGCCGA GACTTTGCGC
CTCGAGCTTT TGAACCTCTG GCAGAGCGGG CGCCTCCCCC TCAAGGGCAT CCTGCTGGTC
ACCCACAACA TCGAGGAGGC GGTGCTGCTG GCCGACCGCA TCCTGGTGCT CTCGAGCAAC
CCCGGCCGCA TCCGGGCCGA GATAGCGGTC ACCCTGGGGC ATCCGCGGGA GCGCGAAGAC
CCCGCCTTCC AGGAGCTGGT CGAGGAGATC TACCGCATCC TGACCACCCG CCCGGCCCCC
GAGCGGGCCA CGCCCGAGCC CCTCACGCTG GGCCACCGCT TGCCCCAGGC CCCGGTGGGG
GCCCTCGCCG GGCTCTTAGA ACGGGTGGCC GAAGGCCCCG ATTACGGCAA GGAAGACCTG
CCCCGCCTGG CCGAGGAGAT GCACCTGGAA GTAGACGACC TCTTCCCCTT GCTGGACGCC
GCCGAGCTGC TGGGCCTGGC CGTGCTGCAG GCCGGCGATA TCCAGCTCAC CGCCGAAGGC
CAGCGCTTTG TAAAGGCCGG CCTGGAGGGG CGCAAGCGCA TCTTCGCCGA GCGCCTGCTC
CAGCAGGTTC CTCTGGTCGG GCACATCCAC CGGGTGCTAA ACACGCGCCC CACCGGGCGG
GCCCCCGAGG AGCGCTTCCT GCGCGAGCTG GAAGACTACA TGTCCACCGA GGACGCCGAA
AAGGTGCTGG CCACGGCCAT CGACTGGGGG CGCTACGCCG AGCTGTTCGA GTACGACTAC
AACACCGGCC TGCTCTCCAG AAGCGAGGAG GTCGCCAGCC CAGCGGCTAG TTGA
 
Protein sequence
MQSNRKTLLE ARNLTKTFTT PEGKPFTVLE GIHLELQEGE IVALLGRSGS GKSTLLRCLS 
GLLRPSAGEV RYRGQPVQGP MPGMAMVFQS FALFPWLTVQ QNVELGLEAM GIPAPQRRQK
ALEAIDLVGL DGFEKAFPKE LSGGMRQRVG FARALVTQPE VLFMDEPMSA LDVLTAETLR
LELLNLWQSG RLPLKGILLV THNIEEAVLL ADRILVLSSN PGRIRAEIAV TLGHPRERED
PAFQELVEEI YRILTTRPAP ERATPEPLTL GHRLPQAPVG ALAGLLERVA EGPDYGKEDL
PRLAEEMHLE VDDLFPLLDA AELLGLAVLQ AGDIQLTAEG QRFVKAGLEG RKRIFAERLL
QQVPLVGHIH RVLNTRPTGR APEERFLREL EDYMSTEDAE KVLATAIDWG RYAELFEYDY
NTGLLSRSEE VASPAAS