Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1020 |
Symbol | |
ID | 8879109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1014530 |
End bp | 1015843 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter-like protein |
Protein accession | YP_003506804 |
Protein GI | 291295406 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.381169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATCCA ACCGCAAAAC CTTGCTAGAG GCCAGAAACC TGACCAAAAC CTTCACCACC CCCGAGGGCA AACCCTTCAC CGTGCTCGAG GGCATCCACC TCGAGCTCCA GGAGGGCGAG ATCGTAGCCC TCTTGGGCCG CAGCGGCTCG GGCAAGAGCA CTCTTTTGCG CTGCCTGAGC GGGCTGTTGC GGCCCTCGGC AGGCGAGGTG CGCTACCGGG GCCAGCCGGT GCAGGGGCCC ATGCCGGGCA TGGCCATGGT CTTCCAGAGC TTTGCCCTCT TCCCCTGGCT CACCGTGCAG CAAAACGTGG AGCTGGGCCT GGAGGCAATG GGCATCCCCG CCCCCCAGCG CCGCCAGAAA GCCCTGGAGG CCATTGACCT GGTGGGGCTG GACGGCTTCG AGAAAGCCTT CCCCAAGGAG CTCTCCGGCG GCATGCGCCA GCGGGTGGGC TTTGCCCGGG CCCTGGTCAC ACAGCCCGAG GTGCTCTTTA TGGACGAGCC CATGAGCGCC CTGGATGTGC TCACCGCCGA GACTTTGCGC CTCGAGCTTT TGAACCTCTG GCAGAGCGGG CGCCTCCCCC TCAAGGGCAT CCTGCTGGTC ACCCACAACA TCGAGGAGGC GGTGCTGCTG GCCGACCGCA TCCTGGTGCT CTCGAGCAAC CCCGGCCGCA TCCGGGCCGA GATAGCGGTC ACCCTGGGGC ATCCGCGGGA GCGCGAAGAC CCCGCCTTCC AGGAGCTGGT CGAGGAGATC TACCGCATCC TGACCACCCG CCCGGCCCCC GAGCGGGCCA CGCCCGAGCC CCTCACGCTG GGCCACCGCT TGCCCCAGGC CCCGGTGGGG GCCCTCGCCG GGCTCTTAGA ACGGGTGGCC GAAGGCCCCG ATTACGGCAA GGAAGACCTG CCCCGCCTGG CCGAGGAGAT GCACCTGGAA GTAGACGACC TCTTCCCCTT GCTGGACGCC GCCGAGCTGC TGGGCCTGGC CGTGCTGCAG GCCGGCGATA TCCAGCTCAC CGCCGAAGGC CAGCGCTTTG TAAAGGCCGG CCTGGAGGGG CGCAAGCGCA TCTTCGCCGA GCGCCTGCTC CAGCAGGTTC CTCTGGTCGG GCACATCCAC CGGGTGCTAA ACACGCGCCC CACCGGGCGG GCCCCCGAGG AGCGCTTCCT GCGCGAGCTG GAAGACTACA TGTCCACCGA GGACGCCGAA AAGGTGCTGG CCACGGCCAT CGACTGGGGG CGCTACGCCG AGCTGTTCGA GTACGACTAC AACACCGGCC TGCTCTCCAG AAGCGAGGAG GTCGCCAGCC CAGCGGCTAG TTGA
|
Protein sequence | MQSNRKTLLE ARNLTKTFTT PEGKPFTVLE GIHLELQEGE IVALLGRSGS GKSTLLRCLS GLLRPSAGEV RYRGQPVQGP MPGMAMVFQS FALFPWLTVQ QNVELGLEAM GIPAPQRRQK ALEAIDLVGL DGFEKAFPKE LSGGMRQRVG FARALVTQPE VLFMDEPMSA LDVLTAETLR LELLNLWQSG RLPLKGILLV THNIEEAVLL ADRILVLSSN PGRIRAEIAV TLGHPRERED PAFQELVEEI YRILTTRPAP ERATPEPLTL GHRLPQAPVG ALAGLLERVA EGPDYGKEDL PRLAEEMHLE VDDLFPLLDA AELLGLAVLQ AGDIQLTAEG QRFVKAGLEG RKRIFAERLL QQVPLVGHIH RVLNTRPTGR APEERFLREL EDYMSTEDAE KVLATAIDWG RYAELFEYDY NTGLLSRSEE VASPAAS
|
| |