Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0860 |
Symbol | |
ID | 8878944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 842934 |
End bp | 844868 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_003506645 |
Protein GI | 291295247 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTGGA GACTCCGTGA ATGGCCCCAT GTGGCCGAAC TTCGACCATT AATTGAGCAA CTGGGTATAC CCCCGCTGGC GGCGGCGGTC TTCTGGAACC GGGGGTTTCG GCGAAAAGAA GACCTCGAGC CCCCCCTGGT ATGCCTTCCC ATCGATGGCC TCAAGCAGGC GGCTTTGCGC ATCATTGAAG CTTTGGAAAA ACGCGAGCGC ATCCGGGTTC ACGGCGATTA CGACGCCGAC GGCTTGACCG GCACGGCGCT GCTGCTGAAC GGTTTGGAGA GGCTGGGCGC CGAGATCCAT GCCTTTATCC CCCACCGCCT GGAGGAGGGC TACGGGGTGC TGATGGATCG GGTGCCGGAG CACCTCGAGG CCTGCGACCT GTTCATCACG GTAGACTGCG GTATCACCAA CCATGCCGAG CTGCGCGCGC TGGTCGAGAA TGGGGTCTCG GTGCTGGTCA CCGATCACCA TTCGCCGGGC GCTGCGCCGC CGCCGGGCCT GGTGGTGCAC CCGGCCCTCT CGCCCGGGCT GCAAGGCCAG GCGCACCCCA CCGGTTCGGG GGTGGCCTTC TTGCTGCTGT GGCAGGTGTA CGAACTGCTG GGCCGGGATC CACCCTTAGA GTACGCCGAC CTGGCCGCAA TTGGTACGGT GGCCGACGTG GCCCCTTTGC AGGGCTTTAA TCGGGCCCTG GTTCAGGAGG GGTTGCGCCG CCTGCGCGAC TCCGCCAACC TGGGCCTCAA AGTACTGGCA GCGGAACACT GCCAGGAATT CAGCGCCAGC GAGATTGCCT TTCGCATCGC GCCCCGCATT AATGCGGCCT CGAGGCTGGG GCAGGCCGGG ATCGCCCTGG AACTCCTCAC CACTCAGGAT GTTTTGCAAG CCGGTGTCCT GGCGGAGCGC CTAACCCAGC TCAATGTGCA GCGGCAGCGC ATCGAAGAGG CCATGCTGGA ACGCATCTGG CCCACCCTTG ACCCCACCCA TCCGGCGTTG GTCATCCACG ATGCCGAAGG GCACCCTGGG GTGATGGGCA TTGTGGCCAG CCGGGTGCTC GAGCGCTACT ACAAGCCGGT GTTTATCATC GCCGAGGGCA AGGGGTCGGT GCGCTCCACA CCCGGTATCA GCGCGGTGGG GGCTTTGCAG TCCGCCAGGG CCTACCTCGA GCGCTTTGGG GGCCACGCCC AAGCGGCGGG GTTTGCCATT CGAGAAAGCC AGATCCCGGC CTTTACCGAG GCCATCCACC GCTATGCAGC GCAGTTCCCG GTGCCAGAAC CCGAGATTGT GCTGGACGGA TGGCTGGATG GGGAAGACTT AGACGAGCTG CACCGAGCCT TACAATTGCT AGAACCCCTG GGTGAGGGCA ACCCCGAACC GTTGTTTTAT ACCCAAGGCA GGCCGGAATA TGTGCGCACC ATGGGCGAGG GCAAGCACCT ATCGTTCCGT TTGAACGGGG TTCGGGTTGT AAAGTGGCGC GACAACGGCG AGCGCCTGCC CGAGGCCCTC GAGCTGGCCG CGGGGCTGGC GCTGAACCGC TGGAACGGCG AACAGAGCAT CGAGCTGAGG GCCCAGGCCT ACCGGCCACT AACGGCCGCC CCGCCATCGG GGTGGGCTAT TCCACTGCCA TTGGCCGAGG CGGTGCGCCA GGCCATTGCC CAGGCCGCCA GGGTGTATGT GCACCCCGAG GGGGCCGGCT GGTTTATCGA GCGGGGGGCC TTAGTGGTGA AGCCCGAAGA GGCCGAGTAC TGGTTCAGCC TGCCGACCCA GCCGGCCCAC CCCCGGCGGG TTTACATCGC CCTTTCGGAG AAGGCCCTGC GGGCTCTGGA GGCCGCGCCC GATCCGCTGG TGCAGGCGCT GGGCCGCCGG GTGGCTACAG CCTACCGCCT GGGGCTGGCG GCGCAGTTGG CGGAGAGCCT CGAGCGTTAC TGGCAGGCTT TATGA
|
Protein sequence | MKWRLREWPH VAELRPLIEQ LGIPPLAAAV FWNRGFRRKE DLEPPLVCLP IDGLKQAALR IIEALEKRER IRVHGDYDAD GLTGTALLLN GLERLGAEIH AFIPHRLEEG YGVLMDRVPE HLEACDLFIT VDCGITNHAE LRALVENGVS VLVTDHHSPG AAPPPGLVVH PALSPGLQGQ AHPTGSGVAF LLLWQVYELL GRDPPLEYAD LAAIGTVADV APLQGFNRAL VQEGLRRLRD SANLGLKVLA AEHCQEFSAS EIAFRIAPRI NAASRLGQAG IALELLTTQD VLQAGVLAER LTQLNVQRQR IEEAMLERIW PTLDPTHPAL VIHDAEGHPG VMGIVASRVL ERYYKPVFII AEGKGSVRST PGISAVGALQ SARAYLERFG GHAQAAGFAI RESQIPAFTE AIHRYAAQFP VPEPEIVLDG WLDGEDLDEL HRALQLLEPL GEGNPEPLFY TQGRPEYVRT MGEGKHLSFR LNGVRVVKWR DNGERLPEAL ELAAGLALNR WNGEQSIELR AQAYRPLTAA PPSGWAIPLP LAEAVRQAIA QAARVYVHPE GAGWFIERGA LVVKPEEAEY WFSLPTQPAH PRRVYIALSE KALRALEAAP DPLVQALGRR VATAYRLGLA AQLAESLERY WQAL
|
| |